RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ATP11CQ8NB49 1132 aa10.13□□□□□ -0.79
CMSS1-201ENST00000421999 SH3KBP1Q96B97 665 aa10.13□□□□□ -0.79
CMSS1-201ENST00000421999 ARHGEF26Q96DR7 871 aa10.13□□□□□ -0.79
CMSS1-201ENST00000421999 CNPY3Q9BT09 278 aa10.13□□□□□ -0.79
CMSS1-201ENST00000421999 GPR63Q9BZJ6 419 aa10.13□□□□□ -0.79
CMSS1-201ENST00000421999 TLE6Q9H808 572 aa10.13□□□□□ -0.79
CMSS1-201ENST00000421999 CARNS1A5YM72 827 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 KRT38O76015 456 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 LSM8O95777 96 aaKnown RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 SPATA31D3P0C874 917 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 CUL1Q13616 776 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 ZNF618Q5T7W0 954 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 SPATA31D4Q6ZUB0 917 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 CCDC149Q6ZUS6 474 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 RNF135Q8IUD6 432 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 GSPT2Q8IYD1 628 aaKnown RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 ULBP1Q9BZM6 244 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 C11orf49Q9H6J7 331 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 SPG21Q9NZD8 308 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 ZMYM2Q9UBW7 1377 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 ARHGAP42A6NI28 874 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 F8VP50 259 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 CBX4O00257 560 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 KIF3CO14782 793 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 PARNO95453 639 aaKnown RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 PAEPP09466 180 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 CCR1P32246 355 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 KPNA1P52294 538 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 TFAP2DQ7Z6R9 452 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 LNX1Q8TBB1 728 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 WHAMMQ8TF30 809 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 SCG3Q8WXD2 468 aaKnown RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 PBXIP1Q96AQ6 731 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 LRRC1Q9BTT6 524 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 THG1LQ9NWX6 298 aaKnown RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 ADAMTSL1Q8N6G6 1762 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 IGKV6D-21A0A0A0MT36 114 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 IQANK1A0A1B0GTG1 560 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 RHOCP08134 193 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 USP17L7P0C7H9 530 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 TBX4P57082 545 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 CCDC15Q0P6D6 951 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 TMTC4Q5T4D3 741 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 DENND1BQ6P3S1 775 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 EGFL8Q99944 293 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 CINPQ9BW66 212 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-201ENST00000421999 ABCB6Q9NP58 842 aa10.12□□□□□ -0.79
CMSS1-201ENST00000421999 CCDC151A5D8V7 595 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 PTK7Q13308 1070 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 BYSLQ13895 437 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 PABPC1LQ4VXU2 614 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 SDHAF4Q5VUM1 108 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 RBM12Q9NTZ6 932 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 HACD3Q9P035 362 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 ZFATQ9P243 1243 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 UXTQ9UBK9 157 aaPredicted RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 KIAA1551Q9HCM1 1747 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 SYNCRIPO60506 623 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 HDCP19113 662 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 P3H1Q32P28 736 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 C9orf57Q5W0N0 161 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 FBXO38Q6PIJ6 1188 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 DCLRE1AQ6PJP8 1040 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 ARNTL2Q8WYA1 636 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 MCUR1Q96AQ8 359 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 AP4E1Q9UPM8 1137 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 E5RJQ4 531 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 ARVCFO00192 962 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 RTN3O95197 1032 aaPredicted RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 HNRNPH3P31942 346 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 RPL9P32969 192 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 CLCN6P51797 869 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 FMO1Q01740 532 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 C1QBPQ07021 282 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 CCDC157Q569K6 752 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 FAM228AQ86W67 206 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 UNC45BQ8IWX7 931 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 TNS4Q8IZW8 715 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 DEFB106AQ8N104 65 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 GPATCH11Q8N954 259 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 GAS2L1Q99501 681 aaPredicted RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 MFSD1Q9H3U5 465 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 ASAH2Q9NR71 780 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 OGFRQ9NZT2 677 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 G3BP2Q9UN86 482 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 A6NNZ2 444 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 IL9RQ01113 521 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 HIF1AQ16665 826 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 TUBB8Q3ZCM7 444 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 LRRC52Q8N7C0 313 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 NOA1Q8NC60 698 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 TTC8Q8TAM2 541 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 ZNF516Q92618 1163 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 UROC1Q96N76 676 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 MRPL45Q9BRJ2 306 aaKnown RBP10.11□□□□□ -0.79
CMSS1-201ENST00000421999 TTPALQ9BTX7 342 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 MARCH2Q9P0N8 246 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms