RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 IGDCC3Q8IVU1 814 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 TP53INP2Q8IXH6 220 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 PLD5Q8N7P1 536 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 P3H4Q92791 437 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 XPO6Q96QU8 1125 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 C12orf65Q9H3J6 166 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 TRMT13Q9NUP7 481 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 INTS9Q9NV88 658 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 GGT7Q9UJ14 662 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 INPP5FQ9Y2H2 1132 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 UNC80Q8N2C7 3258 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 RANBP2P49792 3224 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 MYBPHLA2RUH7 354 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 HGSO14964 777 aaPredicted RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 MGEA5O60502 916 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 STAU1O95793 577 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 AMHP03971 560 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 ASGR1P07306 291 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 GCAP28676 217 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 RBL1P28749 1068 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 CACNB2Q08289 660 aaPredicted RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 SLC10A2Q12908 348 aaPredicted RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 SPRED3Q2MJR0 410 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 BBS9Q3SYG4 887 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 DCAF6Q58WW2 860 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 MDH1BQ5I0G3 518 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 ANKRD52Q8NB46 1076 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 B3GALNT2Q8NCR0 500 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 ATXN2LQ8WWM7 1075 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 TBCBQ99426 244 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 TSPYL2Q9H2G4 693 aaPredicted RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 PCDH18Q9HCL0 1135 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 DRG1Q9Y295 367 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 EXOC1LA0A1B0GW35 172 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 APOC4-APOC2K7ER74 178 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 KCNN4O15554 427 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 AOC2O75106 756 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 DUSP11O75319 330 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 FAM107AO95990 144 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 MYCP01106 439 aaPredicted RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 APOC2P02655 101 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 SLC10A3P09131 477 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 PCK1P35558 622 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 GPX6P59796 221 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 MRPS6P82932 125 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 NME3Q13232 169 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 TAZQ16635 292 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 ANKRD20A8PQ5CZ79 823 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 SPDYCQ5MJ68 293 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 DRICH1Q6PGQ1 229 aaPredicted RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 VSTM1Q6UX27 236 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 GPRIN1Q7Z2K8 1008 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 C4orf33Q8N1A6 199 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 SMC1BQ8NDV3 1235 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 CCDC110Q8TBZ0 833 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 RNF157Q96PX1 679 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 PAIP2Q9BPZ3 127 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 FAM105AQ9NUU6 356 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 DDX20Q9UHI6 824 aaKnown RBP9.18□□□□□ -0.94
SNCA-206ENST00000420646 GTF2IRD1Q9UHL9 959 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 KIAA1257Q9ULG3 409 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 ARL5CA6NH57 179 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 MCF2LO15068 1137 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 AGTP01019 485 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 CD4P01730 458 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 BRAFP15056 766 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 KCNE1P15382 129 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 LIG3P49916 1009 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 LMNB2Q03252 620 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 BST2Q10589 180 aaKnown RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 KCNA10Q16322 511 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 HIF1AQ16665 826 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 ERMARDQ5T6L9 678 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 AGMOQ6ZNB7 445 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 CPLX4Q7Z7G2 160 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 DEFB106AQ8N104 65 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 STKLD1Q8NE28 680 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 KLF6Q99612 283 aaPredicted RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 MED10Q9BTT4 135 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 RSAD1Q9HA92 442 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 PCDH9Q9HC56 1237 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 DERAQ9Y315 318 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 PDE4DIPQ5VU43 2346 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 A0A1W2PPM1 405 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 NRP1O14786 923 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 VIMP08670 466 aaKnown RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 CYBAP13498 195 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 GOT1P17174 413 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 AMPD1P23109 780 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 PTPN7P35236 360 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 GSCP56915 257 aaPredicted RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 BCAR1P56945 870 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 CDC42EP1Q00587 391 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 PKN2Q16513 984 aaKnown RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 TNFAIP8L3Q5GJ75 292 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 LRRC34Q8IZ02 419 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 CRYBG2Q8N1P7 616 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.94
SNCA-206ENST00000420646 THOC1Q96FV9 657 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms