RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 EOGTQ5NDL2 527 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 C10orf76Q5T2E6 689 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 TDRD10Q5VZ19 366 aaKnown RBP13.68□□□□□ -0.22
LINC00339-203ENST00000420503 TOGARAM2Q6ZUX3 1019 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 FAM35AQ86V20 835 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 ZNF513Q8N8E2 541 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-203ENST00000420503 B3GALNT2Q8NCR0 500 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 ZMIZ2Q8NF64 920 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 SPACA7Q96KW9 195 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 CGRRF1Q99675 332 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 CD248Q9HCU0 757 aa13.68□□□□□ -0.22
LINC00339-203ENST00000420503 APC2O95996 2303 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 TBC1D3BA6NDS4 549 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 MDM4O15151 490 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 GREM1O60565 184 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 CCDC130P13994 396 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 PFKLP17858 780 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 PDE6CP51160 858 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 SLC5A3P53794 718 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 ASIC1P78348 528 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 RPL6Q02878 288 aaKnown RBP13.67□□□□□ -0.22
LINC00339-203ENST00000420503 RING1Q06587 406 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 SEMA3BQ13214 749 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 PSMD6Q15008 389 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 SLC39A14Q15043 492 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 ANO4Q32M45 955 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 SLC23A3Q6PIS1 610 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 GPRIN1Q7Z2K8 1008 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 C11orf74Q86VG3 221 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 CHCHD4Q8N4Q1 142 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 DHX58Q96C10 678 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 SLITRK1Q96PX8 696 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
LINC00339-203ENST00000420503 ELOVL4Q9GZR5 314 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 BLZF1Q9H2G9 400 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 CAPN10Q9HC96 672 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 POLMQ9NP87 494 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-203ENST00000420503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00339-203ENST00000420503 OSER1Q9NX31 292 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 CYP8B1Q9UNU6 501 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 MTMR6Q9Y217 621 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 R3HCC1Q9Y3T6 440 aaKnown RBP13.67□□□□□ -0.22
LINC00339-203ENST00000420503 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
LINC00339-203ENST00000420503 ANKRD11Q6UB99 2663 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-203ENST00000420503 IGHV1OR15-9A0A0B4J2B8 117 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 E2F8A0AVK6 867 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 PRRT4C9JH25 899 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 SLC9A3R1O14745 358 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-203ENST00000420503 HOXC11O43248 304 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-203ENST00000420503 HOXB2P14652 356 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 NDUFV2P19404 249 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 EIF2DP41214 584 aaKnown RBP13.66□□□□□ -0.22
LINC00339-203ENST00000420503 TNNC1P63316 161 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 LMAN2Q12907 356 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 PEAR1Q5VY43 1037 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-203ENST00000420503 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 NUP93Q8N1F7 819 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 MINDY1Q8N5J2 469 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 TERB1Q8NA31 727 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 BHMTQ93088 406 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 SMOQ99835 787 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 KBTBD4Q9NVX7 518 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 NUDT5Q9UKK9 219 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 PLXNB3Q9ULL4 1909 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 NUMA1Q14980 2115 aa13.66□□□□□ -0.22
LINC00339-203ENST00000420503 WASH3PC4AMC7 463 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 VNN1O95497 513 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 ZDHHC11BP0C7U3 371 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 CD59P13987 128 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 MAOBP27338 520 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 TNFRSF4P43489 277 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 GAD2Q05329 585 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 ZNF33AQ06730 810 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 SURF1Q15526 300 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 FAM26FQ5R3K3 315 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 TPGS1Q6ZTW0 290 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 ACOT1Q86TX2 421 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 GRAMD1CQ8IYS0 662 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 ZNF507Q8TCN5 953 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 JAKMIP2Q96AA8 810 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 CEP295NLQ96MC4 621 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 HSPA12BQ96MM6 686 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 MED10Q9BTT4 135 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 SPHK2Q9NRA0 654 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 CACNA2D2Q9NY47 1150 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
LINC00339-203ENST00000420503 SH3BP1Q9Y3L3 701 aa13.65□□□□□ -0.22
LINC00339-203ENST00000420503 ACACAQ13085 2346 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 NEDD8-MDP1E9PL57 170 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
LINC00339-203ENST00000420503 PPP3CCP48454 512 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 DLG4P78352 724 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 EHHADHQ08426 723 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 FOXD4L5Q5VV16 416 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms