RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 IL21Q9HBE4 155 aa13.17□□□□□ -0.3
TRAPPC12-206ENST00000417243 CLIC5Q9NZA1 410 aa13.17□□□□□ -0.3
TRAPPC12-206ENST00000417243 UVRAGQ9P2Y5 699 aa13.17□□□□□ -0.3
TRAPPC12-206ENST00000417243 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-206ENST00000417243 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-206ENST00000417243 SIGLEC16A6NMB1 481 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 CCL16O15467 120 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 LINC01565O15544 149 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 TBX10O75333 385 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 TADA3O75528 432 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 DAB1O75553 588 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 LTFP02788 710 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 IGFBP4P22692 258 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 TUBP50607 506 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 TAF12Q16514 161 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 FAM102AQ5T9C2 384 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 Q7L0L9 218 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 MYLIPQ8WY64 445 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.36e-11■■■□□ 18.6
TRAPPC12-206ENST00000417243 ARHGEF26Q96DR7 871 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 IGFLR1Q9H665 355 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 TLR8Q9NR97 1041 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 PARVAQ9NVD7 372 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 MTMR10Q9NXD2 777 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 TMEM59LQ9UK28 342 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-206ENST00000417243 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 RCCD1A6NED2 376 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 YJEFN3A6XGL0 299 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 E7ENQ6 273 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 PIK3R2O00459 728 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 F11P03951 625 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 PTPN2P17706 415 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 CDC25CP30307 473 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 ITIH3Q06033 890 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 TAF10Q12962 218 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 PABPC1LQ4VXU2 614 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 GPR149Q86SP6 731 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 TMEM150AQ86TG1 271 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 SELENOOQ9BVL4 669 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 ABCC13Q9NSE7 274 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 GMIPQ9P107 970 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 LCMT1Q9UIC8 334 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 ZMYM5Q9UJ78 669 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
TRAPPC12-206ENST00000417243 CLUHO75153 1309 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 GOLGA8SH3BPF8 625 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 DPYSL4O14531 572 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 KRT86O43790 486 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 RHOP08100 348 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 KRT3P12035 628 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 FOSL2P15408 326 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 PFKLP17858 780 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 LTBRP36941 435 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.319e-7■■■■□ 23.9
TRAPPC12-206ENST00000417243 KIF5AQ12840 1032 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 PRSS36Q5K4E3 855 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 MSANTD2Q6P1R3 559 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 HFE2Q6ZVN8 426 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 GAREM2Q75VX8 874 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 GOLGA1Q92805 767 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 FAM149B1Q96BN6 582 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 TRIM44Q96DX7 344 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 CDK5RAP1Q96SZ6 601 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 NUP85Q9BW27 656 aa13.14□□□□□ -0.31
TRAPPC12-206ENST00000417243 LACRTQ9GZZ8 138 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms