RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 WHAMMQ8TF30 809 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 TAF4BQ92750 862 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 CHAMP1Q96JM3 812 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 SMOQ99835 787 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 FBXO44Q9H4M3 255 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 ANGPTL2Q9UKU9 493 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
PAF1-202ENST00000416728 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 A0A0A0MRY4 1105 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 LNP1A1A4G5 178 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 KHNYNO15037 678 aaKnown RBP15.27■□□□□ 0.04
PAF1-202ENST00000416728 HOXC11O43248 304 aaPredicted RBP15.27■□□□□ 0.04
PAF1-202ENST00000416728 TLR5O60602 858 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 MYL1P05976 194 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 IRF1P10914 325 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 PFKFB1P16118 471 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 TNFRSF4P43489 277 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 DHPSP49366 369 aaPredicted RBP15.27■□□□□ 0.04
PAF1-202ENST00000416728 NDST1P52848 882 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 MAP3K7CLP57077 242 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 PREPLQ4J6C6 727 aaPredicted RBP15.27■□□□□ 0.04
PAF1-202ENST00000416728 EMC10Q5UCC4 262 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 SV2AQ7L0J3 742 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 UNC93AQ86WB7 457 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 BBS7Q8IWZ6 715 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 CRYBG2Q8N1P7 616 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 NAT16Q8N8M0 369 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 ZMIZ2Q8NF64 920 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 OLIG1Q8TAK6 271 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 SPACA7Q96KW9 195 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.04
PAF1-202ENST00000416728 SPHK2Q9NRA0 654 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 FAM49BQ9NUQ9 324 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 BCCIPQ9P287 314 aaKnown RBP eCLIP15.27■□□□□ 0.04
PAF1-202ENST00000416728 DEC1Q9P2X7 70 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 HMGXB4Q9UGU5 601 aa15.27■□□□□ 0.04
PAF1-202ENST00000416728 A0A1B0GVL5 298 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 TBC1D3BA6NDS4 549 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 C4orf47A7E2U8 309 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 IKBKBO14920 756 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 TULP3O75386 442 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 BEST1O76090 585 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 KIF20AO95235 890 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 KCNK5O95279 499 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 ASS1P00966 412 aaKnown RBP15.26■□□□□ 0.03
PAF1-202ENST00000416728 CHRM1P11229 460 aaPredicted RBP15.26■□□□□ 0.03
PAF1-202ENST00000416728 PMLP29590 882 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 ASPAP45381 313 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 ST3GAL2Q16842 350 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 ANO4Q32M45 955 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 DAB2IPQ5VWQ8 1189 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 SPOPLQ6IQ16 392 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 NUDT18Q6ZVK8 323 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 TRMT11Q7Z4G4 463 aaKnown RBP15.26■□□□□ 0.03
PAF1-202ENST00000416728 ETFBKMTQ8IXQ9 262 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 PHTF2Q8N3S3 785 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 C12orf29Q8N999 325 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 HMGB4Q8WW32 186 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 RLN3Q8WXF3 142 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 IMPG2Q9BZV3 1241 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 CSNK1G1Q9HCP0 422 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 ZDHHC4Q9NPG8 344 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 TLR8Q9NR97 1041 aaKnown RBP15.26■□□□□ 0.03
PAF1-202ENST00000416728 EPG5Q9HCE0 2579 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 EML5Q05BV3 1969 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 CACNA1BQ00975 2339 aa15.26■□□□□ 0.03
PAF1-202ENST00000416728 TCRBV21S2A2A0A5A6 115 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 MAP3K13O43283 966 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 CALUO43852 315 aaPredicted RBP15.25■□□□□ 0.03
PAF1-202ENST00000416728 ADAM23O75077 832 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 KRT37O76014 449 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 HLA-DRAP01903 254 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 FAM200BP0CF97 657 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 CMA1P23946 247 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 ADORA2BP29275 332 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 P2RY2P41231 377 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 PSAPL1Q6NUJ1 521 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 LPCAT2Q7L5N7 544 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 TMEM25Q86YD3 366 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 PGBD3Q8N328 593 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 KCNV2Q8TDN2 545 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 PIGKQ92643 395 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 CCDC47Q96A33 483 aaKnown RBP15.25■□□□□ 0.03
PAF1-202ENST00000416728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.25■□□□□ 0.03
PAF1-202ENST00000416728 TRAF3IP3Q9Y228 551 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 KIAA1549LQ6ZVL6 1849 aa15.25■□□□□ 0.03
PAF1-202ENST00000416728 CNOT1A5YKK6 2376 aaKnown RBP15.25■□□□□ 0.03
PAF1-202ENST00000416728 PATE3B3GLJ2 98 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 PGFP49763 221 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 NOVA1P51513 510 aaKnown RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 VAMP7P51809 220 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 GOLGA8FQ08AF8 430 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 GOLGA8DPQ0D2H9 430 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 BYSLQ13895 437 aaKnown RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 C10orf76Q5T2E6 689 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms