RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 ATP2C2O75185 946 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 URI1O94763 535 aaPredicted RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 PAPLNO95428 1278 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 FGF19O95750 216 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 LSM8O95777 96 aaKnown RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 FTCDO95954 541 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 ASGR2P07307 311 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 MMP8P22894 467 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 WARSP23381 471 aaKnown RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 NSFP46459 744 aaKnown RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 PSMC1P62191 440 aaKnown RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 CNGA2Q16280 664 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 SGO2Q562F6 1265 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 TEX35Q5T0J7 233 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 PPP1R26Q5T8A7 1209 aaPredicted RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 ITIH5Q86UX2 942 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 UNC93AQ86WB7 457 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 PHF13Q86YI8 300 aaPredicted RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 TMEM86AQ8N2M4 240 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 TRIM58Q8NG06 486 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 UBA3Q8TBC4 463 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 C2orf15Q8WU43 125 aaKnown RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 NAPGQ99747 312 aaPredicted RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 TRIM7Q9C029 511 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 RASSF4Q9H2L5 321 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 SNX25Q9H3E2 840 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 ASAH2Q9NR71 780 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 CNOT8Q9UFF9 292 aaKnown RBP9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 GTF3C4Q9UKN8 822 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 INSL5Q9Y5Q6 135 aa9.71□□□□□ -0.85
CHRNA1-206ENST00000416004 M0QYV0 167 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 BUB1BO60566 1050 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 GJB6O95452 261 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 LAMP2P13473 410 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 CCDC130P13994 396 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TUFMP49411 452 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 AMPD2Q01433 879 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 GPR17Q13304 367 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TCEAL1Q15170 157 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 GOLGA7BQ2TAP0 167 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 PTPN20Q4JDL3 420 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 LCLAT1Q6UWP7 414 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TTC30AQ86WT1 665 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 CPNE8Q86YQ8 564 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 CRYBG2Q8N1P7 616 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 FBXL6Q8N531 539 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TMEM35BQ8NCS4 154 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 FAM122AQ96E09 287 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 BTBD6Q96KE9 485 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 RTP3Q9BQQ7 232 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 CORO1BQ9BR76 489 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 IRF2BPLQ9H1B7 796 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 LHX5Q9H2C1 402 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 ADAM22Q9P0K1 906 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 CTTNBP2NLQ9P2B4 639 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TSPAN16Q9UKR8 245 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 HYOU1Q9Y4L1 999 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 ASB3Q9Y575 518 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 CLGNO14967 610 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 MED7O43513 233 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TBC1D4O60343 1298 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 CYP11A1P05108 521 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 RHOP08100 348 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 GPD2P43304 727 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TNNT3P45378 269 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TWF1Q12792 350 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 PKDCCQ504Y2 493 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 RSPO2Q6UXX9 243 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 RNF19BQ6ZMZ0 732 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 HFE2Q6ZVN8 426 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 B3GALNT2Q8NCR0 500 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 LRRN4CLQ8ND94 238 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 SPATA18Q8TC71 538 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 SPPL2BQ8TCT7 592 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 PGLYRP2Q96PD5 576 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 ALS2CR12Q96Q35 445 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 NUP85Q9BW27 656 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 TLR10Q9BXR5 811 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 L2HGDHQ9H9P8 463 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 C11orf16Q9NQ32 467 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 AVENQ9NQS1 362 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 DDX43Q9NXZ2 648 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 GDE1Q9NZC3 331 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 HSFX1Q9UBD0 423 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 KIAA1257Q9ULG3 409 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 PACSIN2Q9UNF0 486 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 DUSP12Q9UNI6 340 aa9.7□□□□□ -0.86
CHRNA1-206ENST00000416004 C5orf42Q9H799 3197 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 SRGAP2O75044 1071 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 GABBR2O75899 941 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 MTA2O94776 668 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 ERBB2P04626 1255 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 PCSK1P29120 753 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 LHX1P48742 406 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 NUBP1P53384 320 aa9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 HADHBP55084 474 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 HNRNPH2P55795 449 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-206ENST00000416004 PFKPQ01813 784 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms