RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 OSER1Q9NX31 292 aa10.61□□□□□ -0.71
TMEM248-202ENST00000413593 SMPD4Q9NXE4 827 aa10.61□□□□□ -0.71
TMEM248-202ENST00000413593 DLGAP2Q9P1A6 1054 aa10.61□□□□□ -0.71
TMEM248-202ENST00000413593 AJAP1Q9UKB5 411 aaPredicted RBP10.61□□□□□ -0.71
TMEM248-202ENST00000413593 MRPS17Q9Y2R5 130 aaKnown RBP10.61□□□□□ -0.71
TMEM248-202ENST00000413593 SIT1Q9Y3P8 196 aa10.61□□□□□ -0.71
TMEM248-202ENST00000413593 MTF2Q9Y483 593 aaPredicted RBP10.61□□□□□ -0.71
TMEM248-202ENST00000413593 ARIH1Q9Y4X5 557 aaPredicted RBP10.61□□□□□ -0.71
TMEM248-202ENST00000413593 WNT6Q9Y6F9 365 aa10.61□□□□□ -0.71
TMEM248-202ENST00000413593 ZNF318Q5VUA4 2279 aa10.61□□□□□ -0.71
TMEM248-202ENST00000413593 OTOL1A6NHN0 477 aaPredicted RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 FAM170BA6NMN3 283 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 SPECC1L-ADORA2AF8WAN1 911 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 M0QYV0 167 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 GALR2O43603 387 aaPredicted RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 TBX18O95935 607 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 DCNP07585 359 aaKnown RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 ARSAP15289 507 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 ZNF18P17022 549 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 CTHP32929 405 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 USP8P40818 1118 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 IFNAR2P48551 515 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 PSEN1P49768 467 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 KPNA1P52294 538 aaPredicted RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 RUNX3Q13761 415 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 ARHGAP44Q17R89 818 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 EML3Q32P44 896 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 ANO6Q4KMQ2 910 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 SMYD5Q6GMV2 418 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 C1orf228Q6PIY5 440 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 TXNDC11Q6PKC3 985 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 RALGPS2Q86X27 583 aaPredicted RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 DDX42Q86XP3 938 aaKnown RBP eCLIP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 KIAA1958Q8N8K9 716 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 PRSS33Q8NF86 280 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 SLC35F5Q8WV83 523 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 KCTD13Q8WZ19 329 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 FAM3CQ92520 227 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 SECISBP2LQ93073 1101 aaKnown RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 PRRX2Q99811 253 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 NACA2Q9H009 215 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 NAT10Q9H0A0 1025 aaKnown RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 VPS16Q9H269 839 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 HSD3B7Q9H2F3 369 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 LRRC4Q9HBW1 653 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 ACP6Q9NPH0 428 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 DUS2Q9NX74 493 aaKnown RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 CLIC5Q9NZA1 410 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 CFAP97Q9P2B7 532 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 LIMA1Q9UHB6 759 aaKnown RBP10.6□□□□□ -0.71
TMEM248-202ENST00000413593 NAGPAQ9UK23 515 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 DNAJC12Q9UKB3 198 aa10.6□□□□□ -0.71
TMEM248-202ENST00000413593 NUP210Q8TEM1 1887 aaPredicted RBP10.59□□□□□ -0.71
TMEM248-202ENST00000413593 COL4A2P08572 1712 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ZBED1O96006 694 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 TPM2P07951 284 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 RALAP11233 206 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 RARGP13631 454 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 PTMSP20962 102 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 GNA15P30679 374 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ATP5C1P36542 298 aaKnown RBP10.59□□□□□ -0.71
TMEM248-202ENST00000413593 GPD2P43304 727 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 COPB1P53618 953 aaKnown RBP10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ADIGQ0VDE8 80 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 FZD5Q13467 585 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 MEA1Q16626 185 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 KLHDC7AQ5VTJ3 777 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 PM20D1Q6GTS8 502 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 PMF1Q6P1K2 205 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 KLHDC10Q6PID8 442 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 BHLHA9Q7RTU4 235 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ARHGAP18Q8N392 663 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ZNF276Q8N554 614 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 AOPEPQ8N6M6 819 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 DTWD2Q8NBA8 298 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ANKRD20A12PQ8NF67 263 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ZNF606Q8WXB4 792 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ATP2A3Q93084 1043 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 CLDN23Q96B33 292 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 BPIFA3Q9BQP9 254 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 FUCA2Q9BTY2 467 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 LSM14BQ9BX40 385 aaKnown RBP10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ULBP1Q9BZM6 244 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 LINC00597Q9H2U6 94 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 ECT2Q9H8V3 914 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 NDRG2Q9UN36 371 aaKnown RBP10.59□□□□□ -0.71
TMEM248-202ENST00000413593 FHOD1Q9Y613 1164 aa10.59□□□□□ -0.71
TMEM248-202ENST00000413593 GREB1Q4ZG55 1949 aa10.58□□□□□ -0.72
TMEM248-202ENST00000413593 F5P12259 2224 aa10.58□□□□□ -0.72
TMEM248-202ENST00000413593 OBSL1O75147 1896 aa10.58□□□□□ -0.72
TMEM248-202ENST00000413593 E2F8A0AVK6 867 aa10.58□□□□□ -0.72
TMEM248-202ENST00000413593 SYCE3A1L190 88 aa10.58□□□□□ -0.72
TMEM248-202ENST00000413593 LRRC10BA6NIK2 292 aa10.58□□□□□ -0.72
TMEM248-202ENST00000413593 FOXN3O00409 490 aaPredicted RBP10.58□□□□□ -0.72
TMEM248-202ENST00000413593 SLC9A3R1O14745 358 aaPredicted RBP10.58□□□□□ -0.72
TMEM248-202ENST00000413593 SCAMP3O14828 347 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms