RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 RCOR1Q9UKL0 485 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 MTCL1Q9Y4B5 1905 aaKnown RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 CITO14578 2027 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 A0A087WWV3 80 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 NT5C1B-RDH14C9J2C7 533 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 INO80B-WBP1J3KQ70 363 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 CCP110O43303 1012 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 MBTPS2O43462 519 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 USO1O60763 962 aaKnown RBP5.77□□□□□ -1.49
LINC00342-201ENST00000412393 TBX10O75333 385 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 ERLIN2O94905 339 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 ARL2P36404 184 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 PBX3P40426 434 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 TECP42680 631 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 TRAPPC10P48553 1259 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 ALDH7A1P49419 539 aaKnown RBP5.77□□□□□ -1.49
LINC00342-201ENST00000412393 RARRES1P49788 294 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 NDUFV1P49821 464 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 ZNF165P49910 485 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 BCAR1P56945 870 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 PTENP60484 403 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 KRT17Q04695 432 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 SMAD4Q13485 552 aaKnown RBP5.77□□□□□ -1.49
LINC00342-201ENST00000412393 TFDP1Q14186 410 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 SURF1Q15526 300 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 CLUL1Q15846 466 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 NOMO2Q5JPE7 1267 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 TTC38Q5R3I4 469 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 SNAP47Q5SQN1 464 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 PLPP4Q5VZY2 271 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 GLB1LQ6UWU2 654 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 MRPL10Q7Z7H8 261 aaKnown RBP5.77□□□□□ -1.49
LINC00342-201ENST00000412393 CATSPER3Q86XQ3 398 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 NOSTRINQ8IVI9 506 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 CCAR2Q8N163 923 aaKnown RBP5.77□□□□□ -1.49
LINC00342-201ENST00000412393 SLC39A11Q8N1S5 342 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 EFHBQ8N7U6 833 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 ERMNQ8TAM6 284 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 RSPH1Q8WYR4 309 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 PGBD4Q96DM1 585 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 EPHX3Q9H6B9 360 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 ENTPD7Q9NQZ7 604 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 CD207Q9UJ71 328 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 LZTS1Q9Y250 596 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 INPP5FQ9Y2H2 1132 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 PCDHB2Q9Y5E7 798 aa5.77□□□□□ -1.49
LINC00342-201ENST00000412393 CNTNAP2Q9UHC6 1331 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 ARHGEF35A5YM69 484 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 LRRIQ4A6NIV6 560 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 MEIS3P2A8K0S8 358 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CLGNO14967 610 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 PER2O15055 1255 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 TSPAN1O60635 241 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 ZC3H11AO75152 810 aaKnown RBP eCLIP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 MED24O75448 989 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 GLP2RO95838 553 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 ITGA4P13612 1032 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 GLRA2P23416 452 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 RPA1P27694 616 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 GJB2P29033 226 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 AXLP30530 894 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 HOXA11P31270 313 aaPredicted RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CCT6AP40227 531 aaKnown RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CCZ1BP86790 482 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CCZ1P86791 482 aaPredicted RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 RNASELQ05823 741 aaKnown RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 POU5F1BQ06416 359 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CAPSQ13938 189 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 PCBP1Q15365 356 aaKnown RBP eCLIP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 SMAD2Q15796 467 aaKnown RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 DUSP6Q16828 381 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 TPD52L1Q16890 204 aaPredicted RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 RTP2Q5QGT7 225 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 HAUS3Q68CZ6 603 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CWF19L1Q69YN2 538 aaKnown RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 MAEAQ7L5Y9 396 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 FILIP1Q7Z7B0 1213 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CABP7Q86V35 215 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 Q8N1X5 172 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 C17orf53Q8N3J3 647 aaPredicted RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 TXLNBQ8N3L3 684 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CNNM3Q8NE01 707 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 MCPH1Q8NEM0 835 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 URGCPQ8TCY9 931 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 ADAMTS17Q8TE56 1095 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 LEO1Q8WVC0 666 aaPredicted RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 ALG3Q92685 438 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CCDC51Q96ER9 411 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 TMEM169Q96HH4 297 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CPB2Q96IY4 423 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 MSLNLQ96KJ4 702 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 CDCA3Q99618 268 aaPredicted RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 DUSP9Q99956 384 aaKnown RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 TCF25Q9BQ70 676 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 POLR3CQ9BUI4 534 aaPredicted RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 C1QTNF1Q9BXJ1 281 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 LRRC3Q9BY71 257 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 TRIM5Q9C035 493 aa5.76□□□□□ -1.49
LINC00342-201ENST00000412393 MKRN2Q9H000 416 aaKnown RBP5.76□□□□□ -1.49
LINC00342-201ENST00000412393 GBP3Q9H0R5 595 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms