RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 BHLHA9Q7RTU4 235 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 TMCO2Q7Z6W1 182 aaPredicted RBP11.74□□□□□ -0.53
RAB1C-201ENST00000409159 EMC1Q8N766 993 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 ATAD1Q8NBU5 361 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 CMASQ8NFW8 434 aaPredicted RBP11.74□□□□□ -0.53
RAB1C-201ENST00000409159 KRT35Q92764 455 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 FAM149B1Q96BN6 582 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
RAB1C-201ENST00000409159 RUNDC3BQ96NL0 473 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 CDK5RAP1Q96SZ6 601 aaKnown RBP11.74□□□□□ -0.53
RAB1C-201ENST00000409159 NPY6RQ99463 290 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 CARD6Q9BX69 1037 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 HOMER3Q9NSC5 361 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 ABCC13Q9NSE7 274 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 CLIC5Q9NZA1 410 aa11.74□□□□□ -0.53
RAB1C-201ENST00000409159 PACSIN2Q9UNF0 486 aaPredicted RBP11.74□□□□□ -0.53
RAB1C-201ENST00000409159 FNDC1Q4ZHG4 1894 aaPredicted RBP11.74□□□□□ -0.53
RAB1C-201ENST00000409159 YJEFN3A6XGL0 299 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 E7ENQ6 273 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 CAPN9O14815 690 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 FSCN2O14926 492 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 PRPSAP2O60256 369 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 SRGAP2O75044 1071 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 TADA3O75528 432 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 GJB6O95452 261 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 TRUB2O95900 331 aaKnown RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 MIPP30301 263 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 MAGEA10P43363 369 aaPredicted RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 TSC2P49815 1807 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 TAS2R40P59535 323 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 RNASE9P60153 205 aaKnown RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 PDK2Q15119 407 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 TAZQ16635 292 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 GLE1Q53GS7 698 aaKnown RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 ACBD5Q5T8D3 534 aaPredicted RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 COL13A1Q5TAT6 717 aaPredicted RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 BSPRYQ5W0U4 402 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 TRNP1Q6NT89 227 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 DENND5BQ6ZUT9 1274 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 GPRIN1Q7Z2K8 1008 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 MAP7D3Q8IWC1 876 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 SCN4BQ8IWT1 228 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 DEFB106AQ8N104 65 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 MMGT1Q8N4V1 131 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 ARFGAP1Q8N6T3 406 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 KLHL23Q8NBE8 558 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 PDZD8Q8NEN9 1154 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 SPATA4Q8NEY3 305 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 FAM71BQ8TC56 605 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 RUBCNQ92622 972 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 PIWIL1Q96J94 861 aaKnown RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 B3GALT6Q96L58 329 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 EMILIN2Q9BXX0 1053 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 FRMD8P1Q9BZ68 369 aaPredicted RBP11.73□□□□□ -0.53
RAB1C-201ENST00000409159 MTUS1Q9ULD2 1270 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 USP18Q9UMW8 372 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 ASB3Q9Y575 518 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 BRCA2P51587 3418 aa11.73□□□□□ -0.53
RAB1C-201ENST00000409159 GOLGA6L10A0A0M3HER8 536 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 ZNF185O15231 689 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 VNN2O95498 520 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 FYNP06241 537 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 ADH1AP07327 375 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 USP17L7P0C7H9 530 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 CSH1P0DML2 217 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 CSH2P0DML3 217 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 PYGMP11217 842 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 YWHAQP27348 245 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 CXCR5P32302 372 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 GBP1P32455 592 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 ELF1P32519 619 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 RDXP35241 583 aaKnown RBP11.72□□□□□ -0.53
RAB1C-201ENST00000409159 YWHAGP61981 247 aaKnown RBP eCLIP11.72□□□□□ -0.53
RAB1C-201ENST00000409159 DUSP4Q13115 394 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 NNTQ13423 1086 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
RAB1C-201ENST00000409159 TAF5Q15542 800 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 DCAF6Q58WW2 860 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 ODF2Q5BJF6 829 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 DCAF12L1Q5VU92 463 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 SNX30Q5VWJ9 437 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 CCDC70Q6NSX1 233 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 MSANTD2Q6P1R3 559 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 RSRC2Q7L4I2 434 aaKnown RBP11.72□□□□□ -0.53
RAB1C-201ENST00000409159 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 CLEC4CQ8WTT0 213 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 FAM172AQ8WUF8 416 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 HDAC7Q8WUI4 952 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 NTAN1Q96AB6 310 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 TRMT2BQ96GJ1 504 aaKnown RBP11.72□□□□□ -0.53
RAB1C-201ENST00000409159 MYRFLQ96LU7 910 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 CFAP57Q96MR6 1250 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 RHOBTB2Q9BYZ6 727 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 OLA1Q9NTK5 396 aaKnown RBP11.72□□□□□ -0.53
RAB1C-201ENST00000409159 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
RAB1C-201ENST00000409159 USTQ9Y2C2 406 aa11.72□□□□□ -0.53
RAB1C-201ENST00000409159 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms