RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 ACAP1Q15027 740 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 ATP13A4Q4VNC1 1196 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 TCEAL5Q5H9L2 206 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 WSCD1Q658N2 575 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 CCDC105Q8IYK2 499 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 B3GALNT2Q8NCR0 500 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 SLC2A14Q8TDB8 520 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 C1orf54Q8WWF1 131 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 SENP8Q96LD8 212 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 SLITRK1Q96PX8 696 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 HERPUD2Q9BSE4 406 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 HEMGNQ9BXL5 484 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 DPH5Q9H2P9 285 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 HOMER3Q9NSC5 361 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
NDEL1-203ENST00000402554 PI4K2BG5E9Z4 385 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 GABRDO14764 452 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 INPPL1O15357 1258 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 RNF8O76064 485 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 FAM153BP0C7A2 387 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 GPD1P21695 349 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 ECHS1P30084 290 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 OR1G1P47890 313 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 ALDH7A1P49419 539 aaKnown RBP13.71□□□□□ -0.21
NDEL1-203ENST00000402554 ZNF143P52747 638 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-203ENST00000402554 ERVFC1P60507 584 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 COPS2P61201 443 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.21
NDEL1-203ENST00000402554 KLF1Q13351 362 aaPredicted RBP13.71□□□□□ -0.21
NDEL1-203ENST00000402554 FAM153CQ494X1 144 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 PLPP4Q5VZY2 271 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 DUPD1Q68J44 220 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 DSTYKQ6XUX3 929 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 ZDHHC17Q8IUH5 632 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 COLGALT2Q8IYK4 626 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 TMEM86AQ8N2M4 240 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 PAAF1Q9BRP4 392 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 CNPY3Q9BT09 278 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 VN1R3Q9BXE9 311 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 TRIM31Q9BZY9 425 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 ASNSD1Q9NWL6 643 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 FAM153AQ9UHL3 310 aa13.71□□□□□ -0.21
NDEL1-203ENST00000402554 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 C2CD4BA6NLJ0 364 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 NRP1O14786 923 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 IGFBP6P24592 240 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 SLC6A3Q01959 620 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 DSC1Q08554 894 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 GRIK3Q13003 919 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 UPP1Q16831 310 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 TXNRD3NBQ6F5E7 133 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 OLFML1Q6UWY5 402 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 MFSD7Q6UXD7 560 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 SPOCD1Q6ZMY3 1216 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 ARFGAP1Q8N6T3 406 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 RXFP2Q8WXD0 754 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 HNRNPABQ99729 332 aaKnown RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 DCLK3Q9C098 648 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 LMAN2LQ9H0V9 348 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 CYLDQ9NQC7 956 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 MARCH5Q9NX47 278 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 KANSL3Q9P2N6 904 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 LRRD1A4D1F6 860 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 ECEL1O95672 775 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 PDGFRAP16234 1089 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 PTPN1P18031 435 aaKnown RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 PTPN7P35236 360 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 PPM1AP35813 382 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 KCNJ1P48048 391 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 LHX1P48742 406 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 DRG2P55039 364 aaKnown RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 TIGD5Q53EQ6 642 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 ANKS1BQ7Z6G8 1248 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 MREGQ8N565 214 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 HASPINQ8TF76 798 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 RAPGEF5Q92565 580 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 SLCO2A1Q92959 643 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 TMEM169Q96HH4 297 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 IGSF21Q96ID5 467 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 PIWIL1Q96J94 861 aaKnown RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 NSUN3Q9H649 340 aaKnown RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 ZWILCHQ9H900 591 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 TLR9Q9NR96 1032 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 CHST7Q9NS84 486 aa13.7□□□□□ -0.22
NDEL1-203ENST00000402554 DDX43Q9NXZ2 648 aaKnown RBP13.7□□□□□ -0.22
NDEL1-203ENST00000402554 DPYSL4O14531 572 aa13.69□□□□□ -0.22
NDEL1-203ENST00000402554 PAPSS1O43252 624 aaPredicted RBP13.69□□□□□ -0.22
NDEL1-203ENST00000402554 ATP2C2O75185 946 aa13.69□□□□□ -0.22
NDEL1-203ENST00000402554 GRAP2O75791 330 aa13.69□□□□□ -0.22
NDEL1-203ENST00000402554 GABBR2O75899 941 aa13.69□□□□□ -0.22
NDEL1-203ENST00000402554 TJP3O95049 919 aa13.69□□□□□ -0.22
NDEL1-203ENST00000402554 ACAT1P24752 427 aaKnown RBP13.69□□□□□ -0.22
NDEL1-203ENST00000402554 TKTP29401 623 aaKnown RBP13.69□□□□□ -0.22
NDEL1-203ENST00000402554 MIPP30301 263 aa13.69□□□□□ -0.22
NDEL1-203ENST00000402554 GBP1P32455 592 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms