RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CASTOR2A6NHX0 329 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 TTC4O95801 387 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 CKBP12277 381 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MAP2K2P36507 400 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MATKP42679 507 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 SLC8A3P57103 927 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MORF4L2Q15014 288 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 NOMO1Q15155 1222 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 ZC3H12AQ5D1E8 599 aaKnown RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 TNFAIP8L3Q5GJ75 292 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 RNASEH2BQ5TBB1 312 aaKnown RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 SLC9A4Q6AI14 798 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 DSTYKQ6XUX3 929 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 CEP128Q6ZU80 1094 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 CCDC25Q86WR0 208 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 GLT1D1Q96MS3 346 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 RTP3Q9BQQ7 232 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 ZNF670Q9BS34 389 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 ROPN1BQ9BZX4 212 aaPredicted RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 ROPN1Q9HAT0 212 aaPredicted RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 RGS18Q9NS28 235 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 NOD1Q9Y239 953 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 PTCH2Q9Y6C5 1203 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 M0QZQ0 153 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 SGK1O00141 431 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 DAB1O75553 588 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 FAM200BP0CF97 657 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 ACTN2P35609 894 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 ADIGQ0VDE8 80 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 GPS1Q13098 491 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MBTPS1Q14703 1052 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 DPYSL2Q16555 572 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 CA9Q16790 459 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 ERMARDQ5T6L9 678 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 SCYL2Q6P3W7 929 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 RTN4RL1Q86UN2 441 aaPredicted RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 PQLC3Q8N755 202 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 PLD5Q8N7P1 536 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MYCBPAPQ8TBZ2 947 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 UROC1Q96N76 676 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MAK16Q9BXY0 300 aaKnown RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 CAPS2Q9BXY5 557 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 SHOC2Q9UQ13 582 aa12.8□□□□□ -0.36
CLIP4-203ENST00000401617 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
CLIP4-203ENST00000401617 MYBPHLA2RUH7 354 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 C9IYK1 514 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PCSK1P29120 753 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 L1CAMP32004 1257 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 IRAK1P51617 712 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 GDF10P55107 478 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 EIF3EP60228 445 aaKnown RBP12.79□□□□□ -0.36
CLIP4-203ENST00000401617 FAM189BP81408 668 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 TUSC3Q13454 348 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 KRT81Q14533 505 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 SLC25A52Q3SY17 297 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 ANKRD20A8PQ5CZ79 823 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 RAB41Q5JT25 222 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 C6orf118Q5T5N4 469 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 FAM171BQ6P995 826 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 FAM35AQ86V20 835 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 ZMIZ2Q8NF64 920 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PCDH19Q8TAB3 1148 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 SLC2A13Q96QE2 648 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 SMOQ99835 787 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 MTMR10Q9NXD2 777 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 COL4A4P53420 1690 aaPredicted RBP12.79□□□□□ -0.36
CLIP4-203ENST00000401617 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 A0A1W2PQ45 241 aaPredicted RBP12.79□□□□□ -0.36
CLIP4-203ENST00000401617 A0A1W2PQY0 241 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 MCF2LO15068 1137 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 TCEA3O75764 348 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 FBXO21O94952 628 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 EOMESO95936 686 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 INHAP05111 366 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 RBP3P10745 1247 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 TGM2P21980 687 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
CLIP4-203ENST00000401617 OTUD1Q5VV17 481 aaPredicted RBP12.79□□□□□ -0.36
CLIP4-203ENST00000401617 MFSD5Q6N075 450 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PCGF5Q86SE9 256 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PSTKQ8IV42 348 aaKnown RBP12.79□□□□□ -0.36
CLIP4-203ENST00000401617 UNC45BQ8IWX7 931 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 ARFGAP2Q8N6H7 521 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PCED1BQ96HM7 432 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PWWP2AQ96N64 755 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 NPY6RQ99463 290 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PKMYT1Q99640 499 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 NINJ2Q9NZG7 142 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 CALCOCO1Q9P1Z2 691 aa12.79□□□□□ -0.36
CLIP4-203ENST00000401617 TIMM13Q9Y5L4 95 aaPredicted RBP12.79□□□□□ -0.36
CLIP4-203ENST00000401617 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms