RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 GOLGA8TH3BQL2 631 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 AKAP10O43572 662 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 INSRRP14616 1297 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 KCNA2P16389 499 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CHRM3P20309 590 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ATN1P54259 1190 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 KLC1Q07866 573 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 MMRN1Q13201 1228 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 FAM83EQ2M2I3 478 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 FUT11Q495W5 492 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 GJC2Q5T442 439 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 ELMSAN1Q6PJG2 1045 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 MPZL3Q6UWV2 235 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 STRA8Q7Z7C7 330 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 RIBC1Q8N443 379 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 SH3TC2Q8TF17 1288 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 FAM172AQ8WUF8 416 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ZNF606Q8WXB4 792 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 EME1Q96AY2 570 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PHF21BQ96EK2 531 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 SLC7A5P2Q9GIP4 190 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CDC42EP4Q9H3Q1 356 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 SLC25A13Q9UJS0 675 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CDYLQ9Y232 598 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ACACAQ13085 2346 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 NCF1BA6NI72 391 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 NCF1CA8MVU1 366 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 AP3B1O00203 1094 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 IGF2BP3O00425 579 aaKnown RBP eCLIP3.37□□□□□ -1.87
KNL1-202ENST00000399668 VWA5AO00534 786 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 GJB6O95452 261 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ASS1P00966 412 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 NCF1P14598 390 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 H2AFXP16104 143 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 SSTR1P30872 391 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 SPRP35270 261 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 TDRD10Q5VZ19 366 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 ADCK2Q7Z695 626 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ARID3BQ8IVW6 561 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 PGBD3Q8N328 593 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 C12orf29Q8N999 325 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ACTRT1Q8TDG2 376 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 FBXO32Q969P5 355 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 YME1L1Q96TA2 773 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 APOL5Q9BWW9 433 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PDGFDQ9GZP0 370 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 SEMA4AQ9H3S1 761 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PLCH1Q4KWH8 1693 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 MARF1Q9Y4F3 1742 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 COL6A6A6NMZ7 2263 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 NBASA2RRP1 2371 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 TJP1Q07157 1748 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 B2RBV5 119 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 TRIM49D1C9J1S8 452 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PSMD3O43242 534 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CYBBP04839 570 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 USP17L7P0C7H9 530 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 GARTP22102 1010 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 NME5P56597 212 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 EML3Q32P44 896 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 GALNTL6Q49A17 601 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 WDR93Q6P2C0 686 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 XRRA1Q6P2D8 792 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 MTHFD1LQ6UB35 978 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CES3Q6UWW8 571 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PCYOX1LQ8NBM8 494 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CNPY3Q9BT09 278 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 UNKQ9C0B0 810 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 ASCC2Q9H1I8 757 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 MROH8Q9H579 483 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 TMEM161AQ9NX61 479 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 SPASTQ9UBP0 616 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PCDHB8Q9UN66 801 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 TRAF3IP3Q9Y228 551 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CDY2AQ9Y6F7 541 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 CDY1Q9Y6F8 540 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 SLC30A1Q9Y6M5 507 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 FREM1Q5H8C1 2179 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 BCORQ6W2J9 1755 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 DUOX1Q9NRD9 1551 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 GTPBP10A4D1E9 387 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 P4HA2O15460 535 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ATP6V1B1P15313 513 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 TAF6P49848 677 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 NUDT2P50583 147 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 GTF2A2P52657 109 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PTENP60484 403 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 DACT2Q5SW24 774 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 PAPD7Q5XG87 772 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 CHSY1Q86X52 802 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ACTL9Q8TC94 416 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 TMC2Q8TDI7 906 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ERLEC1Q96DZ1 483 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 WNK4Q96J92 1243 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 ROPN1BQ9BZX4 212 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 RANBP17Q9H2T7 1088 aaKnown RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 ROPN1Q9HAT0 212 aaPredicted RBP3.37□□□□□ -1.87
KNL1-202ENST00000399668 SCUBE2Q9NQ36 999 aa3.37□□□□□ -1.87
KNL1-202ENST00000399668 OLFML3Q9NRN5 406 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms