RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SERINC1Q9NRX5 453 aa6.54□□□□□ -1.36
TRAPPC13-202ENST00000399438 KCND1Q9NSA2 647 aa6.54□□□□□ -1.36
TRAPPC13-202ENST00000399438 NPFFR2Q9Y5X5 522 aa6.54□□□□□ -1.36
TRAPPC13-202ENST00000399438 ECM29Q5VYK3 1845 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 DUOX1Q9NRD9 1551 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 CLRN2A0PK11 232 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZSCAN12O43309 604 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 PPP1R11O60927 126 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 N4BP1O75113 896 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 BEST1O76090 585 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 ITGAVP06756 1048 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 RAG1P15918 1043 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 TRIM21P19474 475 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 RFC1P35251 1148 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 SEC24CP53992 1094 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 CREB5Q02930 508 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 GRM4Q14833 912 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 CLEC16AQ2KHT3 1053 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 ACAD10Q6JQN1 1059 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 RAB11FIP2Q7L804 512 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 THAP5Q7Z6K1 395 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 TSPYL5Q86VY4 417 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 CDAN1Q8IWY9 1227 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 GMCL1P1Q8NEA9 526 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 ETNPPLQ8TBG4 499 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 GRK7Q8WTQ7 553 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 PNKPQ96T60 521 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 PARD6BQ9BYG5 372 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 NOL6Q9H6R4 1146 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 MMRN2Q9H8L6 949 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 C11orf16Q9NQ32 467 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 SPATA7Q9P0W8 599 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 STK39Q9UEW8 545 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 ARHGAP26Q9UNA1 814 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 LRRC37AA6NMS7 1700 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 LCHNA4D1U4 455 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 PNMA6AP0CW24 399 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 CIITAP33076 1130 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 RAB15P59190 212 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 ARHGAP8P85298 464 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 ITIH3Q06033 890 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 KYNUQ16719 465 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 NT5DC1Q5TFE4 455 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 CDKAL1Q5VV42 579 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 MTFR2Q6P444 385 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 KRT222Q8N1A0 295 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 SPPL3Q8TCT6 385 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 LMBR1Q8WVP7 490 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 CD244Q9BZW8 370 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 LACRTQ9GZZ8 138 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 VEZTQ9HBM0 779 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 BARHL2Q9NY43 387 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 USP36Q9P275 1121 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 DNAJB9Q9UBS3 223 aa6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 REXO2Q9Y3B8 237 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-202ENST00000399438 SYT5O00445 386 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 OR52Z1P0C646 297 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ATP2A2P16615 1042 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 RHOQP17081 205 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 HTR1BP28222 390 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 RDXP35241 583 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 RAD23AP54725 363 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 RUNX1T1Q06455 604 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 KIF5AQ12840 1032 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 POLD3Q15054 466 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 STXBP5Q5T5C0 1151 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TMEM154Q6P9G4 183 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 KLHDC10Q6PID8 442 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 GALNT6Q8NCL4 622 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 BBOF1Q8ND07 529 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CYP2W1Q8TAV3 490 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 SPATA20Q8TB22 786 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM216AQ8WUB2 273 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TUBGCP3Q96CW5 907 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 GOLPH3Q9H4A6 298 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 L2HGDHQ9H9P8 463 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CCM2LQ9NUG4 571 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ABHD10Q9NUJ1 306 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 PPP1R14DQ9NXH3 145 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 FHOD1Q9Y613 1164 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 KCNMB2Q9Y691 235 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 A0A0U1RQK1 487 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF320A2RRD8 509 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 MYMKA6NI61 221 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TTLL8A6PVC2 850 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ANKRD65E5RJM6 399 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 E9PMD0 336 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 VWA5AO00534 786 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CHMP2AO43633 222 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 KLRC4O43908 158 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ASGR1P07306 291 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 JUPP14923 745 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ARF4P18085 180 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 GDI1P31150 447 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 DIO1P49895 249 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TBC1D8BQ0IIM8 1120 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 BMPR2Q13873 1038 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 LBRQ14739 615 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 NONOQ15233 471 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 STK11Q15831 433 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms