RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PGBD4Q96DM1 585 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 PIWIL1Q96J94 861 aaKnown RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 SENP8Q96LD8 212 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 ZFP42Q96MM3 310 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 PPP1R10Q96QC0 940 aaKnown RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 SNRNP25Q9BV90 132 aaKnown RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 DHX35Q9H5Z1 703 aaKnown RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 PRDM16Q9HAZ2 1276 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 FAM200BP0CF97 657 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 SKIP12755 728 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 NPR3P17342 541 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 RPL22P35268 128 aaKnown RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 THPOP40225 353 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 WSCD1Q658N2 575 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 C1orf228Q6PIY5 440 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 STRADAQ7RTN6 431 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 METTL23Q86XA0 190 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 PALM2Q8IXS6 379 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 ZNF473Q8WTR7 871 aaKnown RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 PWWP2AQ96N64 755 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 FRMD8Q9BZ67 464 aaPredicted RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 NSRP1Q9H0G5 558 aaKnown RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 PCDH18Q9HCL0 1135 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 NKIRAS1Q9NYS0 192 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 HEY1Q9Y5J3 304 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 TRPM7Q96QT4 1865 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 PAX3P23760 479 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 PCSK1P29120 753 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 SEC24CP53992 1094 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 MMRN1Q13201 1228 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 ANKRD20A8PQ5CZ79 823 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 PIGZQ86VD9 579 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 TAX1BP1Q86VP1 789 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 ATP11CQ8NB49 1132 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 ARRDC4Q8NCT1 418 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 TRIP11Q15643 1979 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 PTGESO14684 152 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 MLH1P40692 756 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 CDKL3Q8IVW4 592 aaPredicted RBP16.82■□□□□ 0.28
SNX6-202ENST00000396526 CCDC13Q8IYE1 715 aa16.82■□□□□ 0.28
SNX6-202ENST00000396526 DDX43Q9NXZ2 648 aaKnown RBP16.82■□□□□ 0.28
SNX6-202ENST00000396526 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.82■□□□□ 0.28
SNX6-202ENST00000396526 FBXO21O94952 628 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 LIMS2Q7Z4I7 341 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 PRCCQ92733 491 aaPredicted RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 CAPN9O14815 690 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 HOXD10P28358 340 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 MATKP42679 507 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 GKAP1Q5VSY0 366 aaPredicted RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 TRNP1Q6NT89 227 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 FOXR1Q6PIV2 292 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 UNC45BQ8IWX7 931 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 RNF169Q8NCN4 708 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 MDM1Q8TC05 714 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 CHMP6Q96FZ7 201 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 GPATCH2LQ9NWQ4 482 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 AP4E1Q9UPM8 1137 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 RRP15Q9Y3B9 282 aaKnown RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 FAM155AB1AL88 458 aaPredicted RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 ASGR1P07306 291 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 NR2C2P49116 596 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 RPL34P49207 117 aaKnown RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 YWHAZP63104 245 aaKnown RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 PLD5Q8N7P1 536 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 KLC2Q9H0B6 622 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 SENP1Q9P0U3 644 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 GABRQQ9UN88 632 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 NME7Q9Y5B8 376 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 ACTL7BQ9Y614 415 aa16.81■□□□□ 0.28
SNX6-202ENST00000396526 TRIP12Q14669 1992 aaPredicted RBP16.81■□□□□ 0.28
SNX6-202ENST00000396526 HDAC4P56524 1084 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 PPARDQ03181 441 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 RNASELQ05823 741 aaKnown RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 ZNF618Q5T7W0 954 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 EXOC3L1Q86VI1 746 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 PSTKQ8IV42 348 aaKnown RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 KHSRPQ92945 711 aaKnown RBP eCLIP16.8■□□□□ 0.288e-9■■■□□ 15.5
SNX6-202ENST00000396526 FAF2Q96CS3 445 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 HHIPL1Q96JK4 782 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 LPIN3Q9BQK8 851 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 LGALS13Q9UHV8 139 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 GOLGA8MH3BSY2 632 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 CABYRO75952 493 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 BRAFP15056 766 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 NOS2P35228 1153 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 ADIGQ0VDE8 80 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 CCDC38Q502W7 563 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 ZC3H12AQ5D1E8 599 aaKnown RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 TNFAIP8L3Q5GJ75 292 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 ARHGEF18Q6ZSZ5 1173 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 KCTD13Q8WZ19 329 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 CPT1BQ92523 772 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 SYT15Q9BQS2 421 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 TBK1Q9UHD2 729 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 XPO7Q9UIA9 1087 aaKnown RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 NAALADL1Q9UQQ1 740 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms