RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PAXIP1Q6ZW49 1069 aaPredicted RBP15.6■□□□□ 0.09
CBX3-202ENST00000396386 NLRP14Q86W24 1093 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 UNC45BQ8IWX7 931 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 FUKQ8N0W3 1084 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 CENPTQ96BT3 561 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 GAD1Q99259 594 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 C10orf88Q9H8K7 445 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 PPANQ9NQ55 473 aaKnown RBP15.6■□□□□ 0.09
CBX3-202ENST00000396386 GIT1Q9Y2X7 761 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 SMAPO00193 183 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 GABRDO14764 452 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ASGR1P07306 291 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 NPR3P17342 541 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 PTPN1P18031 435 aaKnown RBP15.59■□□□□ 0.09
CBX3-202ENST00000396386 HIF1AQ16665 826 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ANKRD20A8PQ5CZ79 823 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 EFHC1Q5JVL4 640 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 TMEM86AQ8N2M4 240 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 RIBC1Q8N443 379 aaPredicted RBP15.59■□□□□ 0.09
CBX3-202ENST00000396386 FAM71DQ8N9W8 422 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 MYCBPAPQ8TBZ2 947 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 CPT1BQ92523 772 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 CENPIQ92674 756 aaPredicted RBP15.59■□□□□ 0.09
CBX3-202ENST00000396386 SENP8Q96LD8 212 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 DUSP16Q9BY84 665 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.59■□□□□ 0.094e-9■□□□□ 8.8
CBX3-202ENST00000396386 LGALS13Q9UHV8 139 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 H7C0C1 242 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 EBAG9O00559 213 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 TRAPPC3O43617 180 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ATP2C2O75185 946 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 DAB1O75553 588 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 FAM107AO95990 144 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 CHN1P15882 459 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 TFE3P19532 575 aaPredicted RBP15.59■□□□□ 0.09
CBX3-202ENST00000396386 ACAT1P24752 427 aaKnown RBP15.59■□□□□ 0.09
CBX3-202ENST00000396386 THPOP40225 353 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ATP5OP48047 213 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 RAB27AP51159 221 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 SEC24CP53992 1094 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ARL4CP56559 192 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ADIGQ0VDE8 80 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 CA9Q16790 459 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 MDH1BQ5I0G3 518 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ERMARDQ5T6L9 678 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 SLC9A4Q6AI14 798 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 C1orf228Q6PIY5 440 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 PIGZQ86VD9 579 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 GSTCDQ8NEC7 633 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 ZNF473Q8WTR7 871 aaKnown RBP15.59■□□□□ 0.09
CBX3-202ENST00000396386 LPPQ93052 612 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 FAF2Q96CS3 445 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 XPO6Q96QU8 1125 aaKnown RBP15.59■□□□□ 0.09
CBX3-202ENST00000396386 MED10Q9BTT4 135 aa15.59■□□□□ 0.09
CBX3-202ENST00000396386 CFAP69A5D8W1 941 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 GMNCA6NCL1 334 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 CDH16O75309 829 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 CST5P28325 142 aaPredicted RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 CCND3P30281 292 aaPredicted RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 STIP1P31948 543 aaKnown RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 BCAR1P56945 870 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 PPARDQ03181 441 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 PDIA2Q13087 525 aaKnown RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 DPYSL2Q16555 572 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 CCDC142Q17RM4 750 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 CCDC38Q502W7 563 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 STRADAQ7RTN6 431 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 MRPL10Q7Z7H8 261 aaKnown RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 ZC3H18Q86VM9 953 aaKnown RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 PQLC3Q8N755 202 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 PLD5Q8N7P1 536 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 NAT8LQ8N9F0 302 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 KLHDC9Q8NEP7 349 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 MDM1Q8TC05 714 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 ARHGEF2Q92974 986 aaKnown RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 CCT8L2Q96SF2 557 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 SYT15Q9BQS2 421 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 DDX43Q9NXZ2 648 aaKnown RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 CACNG4Q9UBN1 327 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 CTNNAL1Q9UBT7 734 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 AP4E1Q9UPM8 1137 aa15.58■□□□□ 0.08
CBX3-202ENST00000396386 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.58■□□□□ 0.08
CBX3-202ENST00000396386 FRMPD3Q5JV73 1810 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 CLDN5O00501 218 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 ALOX15BO15296 676 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 FAM200BP0CF97 657 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 MATKP42679 507 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 LHX1P48742 406 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 SULT1E1P49888 294 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 SCNN1GP51170 649 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 FASTKD3Q14CZ7 662 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 KCNA10Q16322 511 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 PPP6R3Q5H9R7 873 aaPredicted RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 ANKRD22Q5VYY1 191 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 DSTYKQ6XUX3 929 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms