RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PDIK1LQ8N165 341 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.51■□□□□ 0.39
NUP50-202ENST00000396096 TMEM40Q8WWA1 233 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 DNAJB3Q8WWF6 145 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 SNRNP25Q9BV90 132 aaKnown RBP17.51■□□□□ 0.39
NUP50-202ENST00000396096 DNAI2Q9GZS0 605 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 DPEP3Q9H4B8 488 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 TRABDQ9H4I3 376 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 USP29Q9HBJ7 922 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 NGRNQ9NPE2 291 aaKnown RBP17.51■□□□□ 0.39
NUP50-202ENST00000396096 Q9Y3F1 56 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 DOCK3Q8IZD9 2030 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 BCLAF3A2AJT9 711 aaKnown RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 KPNA7A9QM74 516 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 APOL1O14791 398 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 CHADO15335 359 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 BANF1O75531 89 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 HDAC4P56524 1084 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 IL9RQ01113 521 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 PKN2Q16513 984 aaKnown RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 SPRED3Q2MJR0 410 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 KLHL38Q2WGJ6 581 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 FGFR1OP2Q9NVK5 253 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 PAK5Q9P286 719 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 PIN4Q9Y237 131 aaKnown RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 TRIP12Q14669 1992 aaPredicted RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 ASMTLO95671 621 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 GSTA1P08263 222 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 FGFR1P11362 822 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 AKAP5P24588 427 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 HOXC8P31273 242 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 ACADSBP45954 432 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 CPT1AP50416 773 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 CRYBB1P53674 252 aaPredicted RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 WDR4P57081 412 aaKnown RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 SCYL2Q6P3W7 929 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 ADGRD1Q6QNK2 874 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 FBXO36Q8NEA4 188 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 PCDH19Q8TAB3 1148 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 TGS1Q96RS0 853 aaKnown RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 FRMD8Q9BZ67 464 aaPredicted RBP17.5■□□□□ 0.39
NUP50-202ENST00000396096 GTF2IRD1Q9UHL9 959 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 CPA4Q9UI42 421 aa17.5■□□□□ 0.39
NUP50-202ENST00000396096 H7C0C1 242 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 SPTLC1O15269 473 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 CELF2O95319 508 aaKnown RBP17.49■□□□□ 0.39
NUP50-202ENST00000396096 GNL1P36915 607 aaPredicted RBP17.49■□□□□ 0.39
NUP50-202ENST00000396096 MAGEA6P43360 314 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 SCTRP47872 440 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 ATP5OP48047 213 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 TAF6P49848 677 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 BCAR1P56945 870 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 BASP1P80723 227 aaKnown RBP17.49■□□□□ 0.39
NUP50-202ENST00000396096 DPYSL2Q16555 572 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 NUGGCQ68CJ6 796 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 RGS9BPQ6ZS82 235 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 ZC3H18Q86VM9 953 aaKnown RBP17.49■□□□□ 0.39
NUP50-202ENST00000396096 NME8Q8N427 588 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 GDAP1Q8TB36 358 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 HSFY1Q96LI6 401 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 SMC6Q96SB8 1091 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 PLCD4Q9BRC7 762 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 B3GNT5Q9BYG0 378 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 MLXIPLQ9NP71 852 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 GPATCH2LQ9NWQ4 482 aa17.49■□□□□ 0.39
NUP50-202ENST00000396096 TREHO43280 583 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 FAM163BP0C2L3 166 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 KRT15P19012 456 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 TAC1P20366 129 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 SSTR1P30872 391 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 CA9Q16790 459 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 SV2CQ496J9 727 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 CAPN12Q6ZSI9 719 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 C3orf62Q6ZUJ4 267 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 TRPM8Q7Z2W7 1104 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 GRAMD1AQ96CP6 724 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 LPIN3Q9BQK8 851 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 KATNAL1Q9BW62 490 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 SNX25Q9H3E2 840 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 H0YHG0 523 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 TYROBPO43914 113 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 DNAJC8O75937 253 aaPredicted RBP17.48■□□□□ 0.39
NUP50-202ENST00000396096 TOMM70O94826 608 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 SUN1O94901 812 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 IGHA2P01877 340 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 CCDC130P13994 396 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 ATP2A2P16615 1042 aaKnown RBP17.48■□□□□ 0.39
NUP50-202ENST00000396096 WARSP23381 471 aaKnown RBP17.48■□□□□ 0.39
NUP50-202ENST00000396096 GPR162Q16538 588 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 BBS9Q3SYG4 887 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 C4orf22Q6V702 233 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 PALM2Q8IXS6 379 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 APPL2Q8NEU8 664 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 FBF1Q8TES7 1133 aa17.48■□□□□ 0.39
NUP50-202ENST00000396096 PPP1R13LQ8WUF5 828 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms