RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 M0QZQ0 153 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 KCNK3O14649 394 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CYP26A1O43174 497 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SORBS3O60504 671 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 POTEJP0CG39 1038 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 IVDP26440 423 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CTGFP29279 349 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ADCYAP1R1P41586 468 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 GPD2P43304 727 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SLC25A11Q02978 314 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZNF252P-AS1Q0IIN9 211 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 PDAP1Q13442 181 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 HIC1Q14526 733 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SNX17Q15036 470 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TDRD12Q587J7 1177 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZBTB41Q5SVQ8 909 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RNF220Q5VTB9 566 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RNF43Q68DV7 783 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CYP4V2Q6ZWL3 525 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 PEX26Q7Z412 305 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZNF598Q86UK7 904 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 SLC13A5Q86YT5 568 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 THNSL1Q8IYQ7 743 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TMEM35BQ8NCS4 154 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 BBOF1Q8ND07 529 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZNF564Q8TBZ8 553 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 FBF1Q8TES7 1133 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 U2AF1L4Q8WU68 220 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 SLC35F5Q8WV83 523 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 DYDC1Q8WWB3 177 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 HSFY1Q96LI6 401 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TMEM237Q96Q45 408 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SLC9A7Q96T83 725 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 FMO2Q99518 471 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SELENOSQ9BQE4 189 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 DDX47Q9H0S4 455 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 LRMDAQ9H2I8 198 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZHX3Q9H4I2 956 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 DMAP1Q9NPF5 467 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 CISHQ9NSE2 258 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SLC38A7Q9NVC3 462 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 IL37Q9NZH6 218 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 AMACRQ9UHK6 382 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SCAF8Q9UPN6 1271 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 TRIM33Q9UPN9 1127 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ARL2BPQ9Y2Y0 163 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 KIF26AQ9ULI4 1882 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 LRRIQ4A6NIV6 560 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 LACTBL1A8MY62 500 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 MDM4O15151 490 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 TTI1O43156 1089 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 ITGAVP06756 1048 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 GM2AP17900 193 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 HCAR3P49019 387 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 MYL6P60660 151 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 IFI35P80217 286 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 MGAT5Q09328 741 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 SCAPQ12770 1279 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 NOGQ13253 232 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 C6orf118Q5T5N4 469 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 FAM47EQ6ZV65 393 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 IRGQQ8WZA9 623 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 ALG3Q92685 438 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 EEF2KMTQ96G04 330 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 TMEM176AQ96HP8 235 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 ACAP3Q96P50 834 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 AP1M1Q9BXS5 423 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 FRMD8Q9BZ67 464 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 VCXQ9H320 206 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 PCIF1Q9H4Z3 704 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 SUDS3Q9H7L9 328 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 RRAGCQ9HB90 399 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 PCDH12Q9NPG4 1184 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 RHBDL2Q9NX52 303 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 BLOC1S6Q9UL45 172 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 RPL26L1Q9UNX3 145 aaKnown RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 TRPV2Q9Y5S1 764 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 CST3P01034 146 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 KLRC2P26717 231 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 CA8P35219 290 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 ACADSBP45954 432 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 CDK7P50613 346 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 PMS2P54278 862 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 MRPS6P82932 125 aaKnown RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 PLCB3Q01970 1234 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 MYBPC3Q14896 1274 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 TMEM132DQ14C87 1099 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 GPR162Q16538 588 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 ARTNQ5T4W7 220 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 TCERG1LQ5VWI1 586 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 EEF1DP3Q658K8 133 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 MAP1SQ66K74 1059 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 XYLT1Q86Y38 959 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 TDRPQ86YL5 185 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 RHOT1Q8IXI2 618 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 PRELID2Q8N945 189 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 SMG8Q8ND04 991 aaKnown RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 GLG1Q92896 1179 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms