RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 ATP5C1P36542 298 aaKnown RBP18.36■□□□□ 0.53
SNTB1-201ENST00000395601 FBXO38Q6PIJ6 1188 aa18.36■□□□□ 0.53
SNTB1-201ENST00000395601 UNC93B1Q9H1C4 597 aa18.36■□□□□ 0.53
SNTB1-201ENST00000395601 FBXL5Q9UKA1 691 aa18.36■□□□□ 0.53
SNTB1-201ENST00000395601 GLUD2P49448 558 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 PIGZQ86VD9 579 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 NPAS4Q8IUM7 802 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 ANKRD52Q8NB46 1076 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 FRMD8P1Q9BZ68 369 aaPredicted RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 NDUFS3O75489 264 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 CLTBP09497 229 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 RBM23Q86U06 439 aaKnown RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 RNF135Q8IUD6 432 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 MRPS23Q9Y3D9 190 aaKnown RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 TARSL2A2RTX5 802 aaKnown RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 RNASEH1O60930 286 aaKnown RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 RASSF2P50749 326 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 PLPP4Q5VZY2 271 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 ATG16L1Q676U5 607 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 BCAS4Q8TDM0 211 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 WRAP73Q9P2S5 460 aaPredicted RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 ACRP10323 421 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 NR1D1P20393 614 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 RHOAP61586 193 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 MMEL1Q495T6 779 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 ZNF618Q5T7W0 954 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 WDR59Q6PJI9 974 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 FAM71AQ8IYT1 594 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 PDZD8Q8NEN9 1154 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 CYTH2Q99418 400 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 DCLK3Q9C098 648 aa18.35■□□□□ 0.53
SNTB1-201ENST00000395601 AVENQ9NQS1 362 aaPredicted RBP18.35■□□□□ 0.53
SNTB1-201ENST00000395601 CYP2F1P24903 491 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 GEMP55040 296 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 COPS2P61201 443 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 PURAQ00577 322 aaKnown RBP18.34■□□□□ 0.53
SNTB1-201ENST00000395601 GDF6Q6KF10 455 aaPredicted RBP18.34■□□□□ 0.53
SNTB1-201ENST00000395601 TFAP2DQ7Z6R9 452 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 SHC3Q92529 594 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 PTPRN2Q92932 1015 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 SH3KBP1Q96B97 665 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 UBXN6Q9BZV1 441 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 SMAPO00193 183 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 TUBP50607 506 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 KCNMA1Q12791 1236 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 ZBTB41Q5SVQ8 909 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 HECTD3Q5T447 861 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 C11orf63Q6NUN7 778 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 LINC00523Q86TU6 105 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 HSPA4LO95757 839 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 TPD52P55327 224 aaPredicted RBP18.34■□□□□ 0.53
SNTB1-201ENST00000395601 SFSWAPQ12872 951 aaKnown RBP18.34■□□□□ 0.53
SNTB1-201ENST00000395601 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 ATG4AQ8WYN0 398 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 TMA16Q96EY4 203 aaKnown RBP18.34■□□□□ 0.53
SNTB1-201ENST00000395601 GOLGA8QA0A0J9YX86 632 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 GOLGA8OA6NCC3 632 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 GOLGA8NF8WBI6 632 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 RAD51CO43502 376 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 FDFT1P37268 417 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 E2F5Q15329 346 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 CHMP6Q96FZ7 201 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 MRPL45Q9BRJ2 306 aaKnown RBP18.34■□□□□ 0.53
SNTB1-201ENST00000395601 ARHGAP39Q9C0H5 1083 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 PKP3Q9Y446 797 aa18.34■□□□□ 0.53
SNTB1-201ENST00000395601 SUN1O94901 812 aa18.33■□□□□ 0.53
SNTB1-201ENST00000395601 GLUD1P00367 558 aa18.33■□□□□ 0.53
SNTB1-201ENST00000395601 FAXCQ5TGI0 409 aa18.33■□□□□ 0.53
SNTB1-201ENST00000395601 RETSATQ6NUM9 610 aa18.33■□□□□ 0.53
SNTB1-201ENST00000395601 LGI2Q8N0V4 545 aa18.33■□□□□ 0.53
SNTB1-201ENST00000395601 PAWRQ96IZ0 340 aaKnown RBP18.33■□□□□ 0.53
SNTB1-201ENST00000395601 XPO6Q96QU8 1125 aaKnown RBP18.33■□□□□ 0.53
SNTB1-201ENST00000395601 PRR23AA6NEV1 266 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 FGFR1P11362 822 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 FNTAP49354 379 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 MTM1Q13496 603 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 TBC1D1Q86TI0 1168 aaPredicted RBP18.33■□□□□ 0.52
SNTB1-201ENST00000395601 NUP93Q8N1F7 819 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 TRIB2Q92519 343 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 C9orf72Q96LT7 481 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 ZNF263O14978 683 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 CTIFO43310 598 aaKnown RBP18.33■□□□□ 0.52
SNTB1-201ENST00000395601 SYNCRIPO60506 623 aaKnown RBP18.33■□□□□ 0.52
SNTB1-201ENST00000395601 RAMP2O60895 175 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 GJB6O95452 261 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 EOMESO95936 686 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 HDCP19113 662 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 OR1E1P30953 314 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 NOS2P35228 1153 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 GJA9P57773 515 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 UGP2Q16851 508 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 CDC26Q8NHZ8 85 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 CHMP2BQ9UQN3 213 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 ARL5CA6NH57 179 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 JCHAINP01591 159 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 TMPRSS15P98073 1019 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 MAP3K10Q02779 954 aa18.33■□□□□ 0.52
SNTB1-201ENST00000395601 PKN2Q16513 984 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms