RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SLC20A1Q8WUM9 679 aa20.94■□□□□ 0.94
SNCA-203ENST00000394986 DEPDC1BQ8WUY9 529 aa20.94■□□□□ 0.94
SNCA-203ENST00000394986 DDX1Q92499 740 aaKnown RBP20.94■□□□□ 0.94
SNCA-203ENST00000394986 ZFYVE19Q96K21 471 aa20.94■□□□□ 0.94
SNCA-203ENST00000394986 TRMT61BQ9BVS5 477 aaKnown RBP20.94■□□□□ 0.94
SNCA-203ENST00000394986 MIS12Q9H081 205 aa20.94■□□□□ 0.94
SNCA-203ENST00000394986 TJP2Q9UDY2 1190 aa20.94■□□□□ 0.94
SNCA-203ENST00000394986 PCDHGC3Q9UN70 934 aa20.94■□□□□ 0.94
SNCA-203ENST00000394986 ZNF638Q14966 1978 aaKnown RBP20.93■□□□□ 0.94
SNCA-203ENST00000394986 MYO10Q9HD67 2058 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 MYO16Q9Y6X6 1858 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 RARGP13631 454 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 PBX1P40424 430 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 ZNF268Q14587 947 aaPredicted RBP20.93■□□□□ 0.94
SNCA-203ENST00000394986 PM20D1Q6GTS8 502 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 SH3RF2Q8TEC5 729 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 E2F7Q96AV8 911 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 HSFY1Q96LI6 401 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 XPO4Q9C0E2 1151 aaKnown RBP20.93■□□□□ 0.94
SNCA-203ENST00000394986 BRD9Q9H8M2 597 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.93■□□□□ 0.94
SNCA-203ENST00000394986 OBP2AQ9NY56 170 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 ARHGAP26Q9UNA1 814 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 DENND4CQ5VZ89 1909 aa20.93■□□□□ 0.94
SNCA-203ENST00000394986 NUP210Q8TEM1 1887 aaPredicted RBP20.92■□□□□ 0.94
SNCA-203ENST00000394986 TRIOO75962 3097 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 ANAPC1Q9H1A4 1944 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 YJEFN3A6XGL0 299 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 E7ENQ6 273 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 SCAMP3O14828 347 aaKnown RBP20.92■□□□□ 0.94
SNCA-203ENST00000394986 TUBP50607 506 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 DAOAP59103 153 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 YWHAGP61981 247 aaKnown RBP eCLIP20.92■□□□□ 0.94
SNCA-203ENST00000394986 SLC7A9P82251 487 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 SIGLEC14Q08ET2 396 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 FCHO2Q0JRZ9 810 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 USP4Q13107 963 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 PDCLQ13371 301 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 ZNF77Q15935 545 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 TRIM67Q6ZTA4 783 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 HFE2Q6ZVN8 426 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 YAF2Q8IY57 180 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 BAP1Q92560 729 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 ASIC4Q96FT7 647 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 SLC4A5Q9BY07 1137 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 PDCL3Q9H2J4 239 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 KIF9Q9HAQ2 790 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 CYLDQ9NQC7 956 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 SLC2A4RGQ9NR83 387 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 NOCTQ9UK39 431 aaKnown RBP20.92■□□□□ 0.94
SNCA-203ENST00000394986 FBXL21Q9UKT6 434 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 CA14Q9ULX7 337 aa20.92■□□□□ 0.94
SNCA-203ENST00000394986 E5RJQ4 531 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 LEFTY2O00292 366 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 MMEP08473 750 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 PFKLP17858 780 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 ZFRQ96KR1 1074 aaKnown RBP20.91■□□□□ 0.94
SNCA-203ENST00000394986 TTYH3Q9C0H2 523 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 NACA2Q9H009 215 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 LHX5Q9H2C1 402 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 C11orf16Q9NQ32 467 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 CNGB3Q9NQW8 809 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 GKN1Q9NS71 199 aa20.91■□□□□ 0.94
SNCA-203ENST00000394986 ZNF263O14978 683 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 CHRNB2P17787 502 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 RPL34P49207 117 aaKnown RBP20.9■□□□□ 0.94
SNCA-203ENST00000394986 MTF1Q14872 753 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 C10orf120Q5SQS8 335 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 TRIM68Q6AZZ1 485 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 GAS2L3Q86XJ1 694 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 SCUBE3Q8IX30 993 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 TTC8Q8TAM2 541 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 STK32AQ8WU08 396 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 EDEM1Q92611 657 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 CPXM1Q96SM3 734 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 RBSNQ9H1K0 784 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 CFAP97Q9P2B7 532 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 COL4A3Q01955 1670 aa20.9■□□□□ 0.94
SNCA-203ENST00000394986 TMEM221A6NGB7 291 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 LRRC53A6NM62 1247 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 M0R296 226 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 ARNTLO00327 626 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 PAPSS1O43252 624 aaPredicted RBP20.89■□□□□ 0.94
SNCA-203ENST00000394986 PDGFBP01127 241 aaPredicted RBP20.89■□□□□ 0.94
SNCA-203ENST00000394986 IRF1P10914 325 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 PSEN1P49768 467 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 TNK2Q07912 1038 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 SIX5Q8N196 739 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 ARHGAP18Q8N392 663 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 WBP2Q969T9 261 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 PIWIL1Q96J94 861 aaKnown RBP20.89■□□□□ 0.94
SNCA-203ENST00000394986 HEBP1Q9NRV9 189 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 CLIC5Q9NZA1 410 aa20.89■□□□□ 0.94
SNCA-203ENST00000394986 KRBA1A5PL33 1030 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 CHADO15335 359 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 RALAP11233 206 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 ATP5C1P36542 298 aaKnown RBP20.88■□□□□ 0.93
SNCA-203ENST00000394986 ACADSBP45954 432 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 PLCB2Q00722 1185 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 FMO1Q01740 532 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms