RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PDIA2Q13087 525 aaKnown RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 AGMOQ6ZNB7 445 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 PYROXD2Q8N2H3 581 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 PLD5Q8N7P1 536 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 TTC13Q8NBP0 860 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 STK32AQ8WU08 396 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 P3H4Q92791 437 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 ARHGEF2Q92974 986 aaKnown RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 SENP8Q96LD8 212 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 ROPN1BQ9BZX4 212 aaPredicted RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 ROPN1Q9HAT0 212 aaPredicted RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 MLXIPLQ9NP71 852 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 COX16Q9P0S2 106 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 ARL5CA6NH57 179 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 DPYSL4O14531 572 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 TRAPPC3O43617 180 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 AOC2O75106 756 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 ADAMTS4O75173 837 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 PTPN1P18031 435 aaKnown RBP15.72■□□□□ 0.11
GPC3-202ENST00000394299 LRPAP1P30533 357 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 ADIGQ0VDE8 80 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 LRRC14Q15048 493 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 ANKRD20A8PQ5CZ79 823 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 MDH1BQ5I0G3 518 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 SERINC5Q86VE9 423 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 CCDC185Q8N715 623 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 CCHCR1Q8TD31 782 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 MGARPQ8TDB4 240 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 TBCBQ99426 244 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 TSPYL1Q9H0U9 437 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 XPNPEP3Q9NQH7 507 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 RNF186Q9NXI6 227 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 NAALADL1Q9UQQ1 740 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 NR2E3Q9Y5X4 410 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 GMNCA6NCL1 334 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 A6NNZ2 444 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 H7C0C1 242 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 MCF2LO15068 1137 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 SEPT4O43236 478 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 TMEM63AO94886 807 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 ATP5OP48047 213 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 MORF4L2Q15014 288 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 TUBB8Q3ZCM7 444 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 BOLA3Q53S33 107 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 MFSD5Q6N075 450 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.72■□□□□ 0.11
GPC3-202ENST00000394299 FAM149B1Q96BN6 582 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 DHX35Q9H5Z1 703 aaKnown RBP15.72■□□□□ 0.11
GPC3-202ENST00000394299 CRTAC1Q9NQ79 661 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 TMEM30AQ9NV96 361 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 DDX43Q9NXZ2 648 aaKnown RBP15.72■□□□□ 0.11
GPC3-202ENST00000394299 MFHAS1Q9Y4C4 1052 aa15.72■□□□□ 0.11
GPC3-202ENST00000394299 POMCP01189 267 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 WARSP23381 471 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 IFNAR2P48551 515 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 CACNA2D1P54289 1103 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 MAP3K7CLP57077 242 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 BASP1P80723 227 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 NOMO1Q15155 1222 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 SLC26A9Q7LBE3 791 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 DEFB106AQ8N104 65 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 KCNK16Q96T55 309 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 WDR83Q9BRX9 315 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 C11orf84Q9BUA3 381 aaPredicted RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 PADI3Q9ULW8 664 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 PDCD11Q14690 1871 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 MYBPHLA2RUH7 354 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 TMEM88BA6NKF7 163 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 POC1B-GALNT4F8VUJ3 575 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 THP07101 528 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 GCAP28676 217 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 MGAT3Q09327 533 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 MPP2Q14168 576 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 FAXCQ5TGI0 409 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 HFE2Q6ZVN8 426 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 FAM131BQ86XD5 332 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 RELL1Q8IUW5 271 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 TOP6BLQ8N6T0 577 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 NAT8LQ8N9F0 302 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 HASPINQ8TF76 798 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 TNIP3Q96KP6 325 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 XPO6Q96QU8 1125 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 PRMT1Q99873 361 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 MED10Q9BTT4 135 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 DUSP16Q9BY84 665 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 RHOBTB2Q9BYZ6 727 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 VPS37BQ9H9H4 285 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 USP29Q9HBJ7 922 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 SPC25Q9HBM1 224 aa15.71■□□□□ 0.11
GPC3-202ENST00000394299 RRP15Q9Y3B9 282 aaKnown RBP15.71■□□□□ 0.11
GPC3-202ENST00000394299 SCN10AQ9Y5Y9 1956 aa15.71■□□□□ 0.1
GPC3-202ENST00000394299 EBAG9O00559 213 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 GABRDO14764 452 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 KPNA6O60684 536 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 RBL1P28749 1068 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms