RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PANK2Q9BZ23 570 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 CCSER2Q9H7U1 834 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 KIAA1586Q9HCI6 787 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 CALCOCO1Q9P1Z2 691 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 MSRB2Q9Y3D2 182 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 IGSF10Q6WRI0 2623 aa16.33■□□□□ 0.2
CHMP3-202ENST00000393773 TGFB1I1O43294 461 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 AP5Z1O43299 807 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 RTN3O95197 1032 aaPredicted RBP16.32■□□□□ 0.2
CHMP3-202ENST00000393773 FAM163BP0C2L3 166 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 HOXB2P14652 356 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 SIM1P81133 766 aaPredicted RBP16.32■□□□□ 0.2
CHMP3-202ENST00000393773 TP53BP1Q12888 1972 aaPredicted RBP16.32■□□□□ 0.2
CHMP3-202ENST00000393773 E2F4Q16254 413 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 WDR72Q3MJ13 1102 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 C10orf76Q5T2E6 689 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 SNX30Q5VWJ9 437 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 TRMT11Q7Z4G4 463 aaKnown RBP16.32■□□□□ 0.2
CHMP3-202ENST00000393773 BBS7Q8IWZ6 715 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 PGBD3Q8N328 593 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 PDILTQ8N807 584 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 KCNV2Q8TDN2 545 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 USP28Q96RU2 1077 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 TNMDQ9H2S6 317 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 SMYD3Q9H7B4 428 aa16.32■□□□□ 0.2
CHMP3-202ENST00000393773 SMG1Q96Q15 3661 aaKnown RBP16.32■□□□□ 0.2
CHMP3-202ENST00000393773 UBE4BO95155 1302 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 IGHV1OR15-9A0A0B4J2B8 117 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 A0A1W2PQF6 199 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 FAM92AA1XBS5 289 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 A8MXQ7 604 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 TRIM24O15164 1050 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 SERPINF2P08697 491 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 ZDHHC11BP0C7U3 371 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 TNNI1P19237 187 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 SLC5A3P53794 718 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 MYL6P60660 151 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 FAM193AP78312 1265 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 RPL6Q02878 288 aaKnown RBP16.31■□□□□ 0.2
CHMP3-202ENST00000393773 DUOXA1Q1HG43 343 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 PAQR9Q6ZVX9 377 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 NAT16Q8N8M0 369 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 SCAMP5Q8TAC9 235 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 CEP76Q8TAP6 659 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 ZNF516Q92618 1163 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 KCNK16Q96T55 309 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 GTPBP2Q9BX10 602 aaKnown RBP16.31■□□□□ 0.2
CHMP3-202ENST00000393773 SPHK2Q9NRA0 654 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 GMIPQ9P107 970 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 SLC6A14Q9UN76 642 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 SH3BP1Q9Y3L3 701 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 CELSR3Q9NYQ7 3312 aa16.31■□□□□ 0.2
CHMP3-202ENST00000393773 TBC1D3BA6NDS4 549 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 GREM1O60565 184 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 NDUFV2P19404 249 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 PDCP20941 246 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 ZNF33AQ06730 810 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 EGFLAMQ63HQ2 1017 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 SLC36A4Q6YBV0 504 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 TMEM25Q86YD3 366 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 SLC41A1Q8IVJ1 513 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 MINDY1Q8N5J2 469 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 DEFB119Q8N690 84 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 RDH13Q8NBN7 331 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 OR2I1PQ8NGU4 316 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 ZNF507Q8TCN5 953 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 CCDC127Q96BQ5 260 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 DMAP1Q9NPF5 467 aaPredicted RBP16.3■□□□□ 0.2
CHMP3-202ENST00000393773 DEC1Q9P2X7 70 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 STARD13Q9Y3M8 1113 aa16.3■□□□□ 0.2
CHMP3-202ENST00000393773 MUC22E2RYF6 1773 aaPredicted RBP16.3■□□□□ 0.2
CHMP3-202ENST00000393773 TMEM131Q92545 1883 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 FAM221BA6H8Z2 402 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 OPHN1O60890 802 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 CAPNS1P04632 268 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 IRF1P10914 325 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 SYT1P21579 422 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 NTSR1P30989 418 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-202ENST00000393773 PGFP49763 221 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 CYP2J2P51589 502 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 GFPT1Q06210 699 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-202ENST00000393773 RING1Q06587 406 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 EHHADHQ08426 723 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 ANO4Q32M45 955 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 FAM26FQ5R3K3 315 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 BTBD8Q5XKL5 378 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 RABEPKQ7Z6M1 372 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 HDDC3Q8N4P3 179 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 ZMIZ2Q8NF64 920 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 PLEKHO2Q8TD55 490 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms