RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 GREM1O60565 184 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 EPN2O95208 641 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 KIF20AO95235 890 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 APBB3O95704 486 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 TBX18O95935 607 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 CCDC192P0DO97 292 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 ADORA2BP29275 332 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 PSMC2P35998 433 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 ENPEPQ07075 957 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 SF3A2Q15428 464 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 PLK5Q496M5 336 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 LY6G5CQ5SRR4 150 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 DDX42Q86XP3 938 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 BBS7Q8IWZ6 715 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 CCDC33Q8N5R6 958 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 NETO1Q8TDF5 533 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 SEMA4DQ92854 862 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 ACDQ96AP0 544 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 LOXL4Q96JB6 756 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 DUSP15Q9H1R2 295 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 MMRN2Q9H8L6 949 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 TPRP12270 2363 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 NUP205Q92621 2012 aa19.3■□□□□ 0.68
PDLIM7-205ENST00000393551 SLC30A4O14863 429 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 CILPO75339 1184 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 PNOCQ13519 176 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 PLA2G2CQ5R387 149 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 EMC10Q5UCC4 262 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 TMEM92Q6UXU6 159 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 FMR1NBQ8N0W7 255 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 CCDC47Q96A33 483 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 CYFIP2Q96F07 1278 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 PNKPQ96T60 521 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 DUSP9Q99956 384 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 NIF3L1Q9GZT8 377 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 CYP3A43Q9HB55 503 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 TBC1D14Q9P2M4 693 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 MMP17Q9ULZ9 603 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 ATP6V1DQ9Y5K8 247 aa19.29■□□□□ 0.68
PDLIM7-205ENST00000393551 THADAQ6YHU6 1953 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 CYP26A1O43174 497 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 TLR5O60602 858 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 KAT7O95251 611 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 ADH1CP00326 375 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 ZNF806P0C7X5 589 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 FAM200BP0CF97 657 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 ADH5P11766 374 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 CD58P19256 250 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 RPL13P26373 211 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 EIF2DP41214 584 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 KIR2DL1P43626 348 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 CRY1Q16526 586 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 RASSF3Q86WH2 238 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 TMEM25Q86YD3 366 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 ETFBKMTQ8IXQ9 262 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 ALLCQ8N6M5 410 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 IL17RCQ8NAC3 791 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 NT5C1AQ9BXI3 368 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 KLF16Q9BXK1 252 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 SMOC1Q9H4F8 434 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 FBXO44Q9H4M3 255 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 NMUR1Q9HB89 426 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 TMEM8AQ9HCN3 771 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 ZDHHC4Q9NPG8 344 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 SCML2Q9UQR0 700 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 INVSQ9Y283 1065 aa19.28■□□□□ 0.68
PDLIM7-205ENST00000393551 IRF1P10914 325 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 KRT13P13646 458 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 MRPS21P82921 87 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 KDSRQ06136 332 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 EDRF1Q3B7T1 1238 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 NAT16Q8N8M0 369 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 MDGA1Q8NFP4 955 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 TSTD1Q8NFU3 115 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 JAKMIP2Q96AA8 810 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 OTUB2Q96DC9 234 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 TPSD1Q9BZJ3 242 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 IMPG2Q9BZV3 1241 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 CYLDQ9NQC7 956 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 TLR8Q9NR97 1041 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 HCN2Q9UL51 889 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 SH3BP1Q9Y3L3 701 aa19.27■□□□□ 0.68
PDLIM7-205ENST00000393551 SGK1O00141 431 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 TRIM24O15164 1050 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ADAM23O75077 832 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ACO1P21399 889 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 GTF2H1P32780 548 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 TIE1P35590 1138 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 GRIA2P42262 883 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 PRCPP42785 496 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 DGKEP52429 567 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 PPP1R26Q5T8A7 1209 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 KRT39Q6A163 491 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ANO7Q6IWH7 933 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 TXNDC5Q8NBS9 432 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ENGASEQ8NFI3 743 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 CCDC26Q8TAB7 109 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ERCC4Q92889 916 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ARID3AQ99856 593 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ARHGEF4Q9NR80 690 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms