RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 DOK6Q6PKX4 331 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 METTL16Q86W50 562 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 ELOA2Q8IYF1 753 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 MEIOBQ8N635 442 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 BHLHE22Q8NFJ8 381 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 COQ8AQ8NI60 647 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 APPBP2Q92624 585 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TAMM41Q96BW9 452 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ZNF594Q96JF6 807 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 PNKPQ96T60 521 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TRIM62Q9BVG3 475 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PUS3Q9BZE2 481 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 WDR12Q9GZL7 423 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 CYP4F12Q9HCS2 524 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 RBM12Q9NTZ6 932 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 XPR1Q9UBH6 696 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CNOT8Q9UFF9 292 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 CHORDC1Q9UHD1 332 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 PCDHGA10Q9Y5H3 936 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SOS1Q07889 1333 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 E7EWF7 191 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 K7EPK0 472 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 C2CD2LO14523 706 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 KCNN4O15554 427 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 RAD51CO43502 376 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ZMPSTE24O75844 475 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 FARP2O94887 1054 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 TXNDC12O95881 172 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CD2P06729 351 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 WEE2P0C1S8 567 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MYCLP1P12525 358 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 CALB2P22676 271 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PSMC2P35998 433 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 ARHGDIBP52566 201 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MAPK12P53778 367 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 AQP5P55064 265 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PKNOX1P55347 436 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 HPCAP84074 193 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 DMP1Q13316 513 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 C1DQ13901 141 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 SLC45A4Q5BKX6 768 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PAGE2BQ5JRK9 111 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 FAM26FQ5R3K3 315 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PI16Q6UXB8 463 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PRR23BQ6ZRT6 265 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 FAM92BQ6ZTR7 304 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 EXOC3L1Q86VI1 746 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CMTR2Q8IYT2 770 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 FAM71E2Q8N5Q1 922 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 C8orf58Q8NAV2 365 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MOSPD2Q8NHP6 518 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ZNF564Q8TBZ8 553 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 HPS3Q969F9 1004 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PMEPA1Q969W9 287 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 C11orf70Q9BRQ4 267 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TMED9Q9BVK6 235 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ZNF408Q9H9D4 720 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 DDX20Q9UHI6 824 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 GGA1Q9UJY5 639 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SCAF8Q9UPN6 1271 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 VPS9D1Q9Y2B5 631 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 COQ6Q9Y2Z9 468 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MROH7Q68CQ1 1323 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 OR14I1A6ND48 311 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 BTBD18B2RXH4 712 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 HNRNPDLO14979 420 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 MTSS1O43312 755 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 OIP5O43482 229 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ZC3H11AO75152 810 aaKnown RBP eCLIP3.37□□□□□ -1.87
PHF3-202ENST00000393387 SNX4O95219 450 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PLCG1P19174 1290 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 AP1S1P61966 158 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PPP2R2BQ00005 443 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SLC39A6Q13433 755 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 BRDTQ58F21 947 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 KRBOX4Q5JUW0 171 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ODR4Q5SWX8 454 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 KLHL35Q6PF15 583 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SSX6Q7RTT6 188 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PEG10Q86TG7 708 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 PCYOX1LQ8NBM8 494 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 OR5T1Q8NG75 326 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SLC7A3Q8WY07 619 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PROX1Q92786 737 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 LPIN3Q9BQK8 851 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TRIM2Q9C040 744 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TGIF2Q9GZN2 237 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ELL3Q9HB65 397 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 FANCFQ9NPI8 374 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TAGLN3Q9UI15 199 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CSADQ9Y600 493 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CDHR2Q9BYE9 1310 aa3.36□□□□□ -1.87
PHF3-202ENST00000393387 ZNF705FA8MVS1 300 aaPredicted RBP3.36□□□□□ -1.87
PHF3-202ENST00000393387 H3BN98 237 aa3.36□□□□□ -1.87
PHF3-202ENST00000393387 ACSL4O60488 711 aa3.36□□□□□ -1.87
PHF3-202ENST00000393387 CAPN15O75808 1086 aa3.36□□□□□ -1.87
PHF3-202ENST00000393387 FCER2P06734 321 aa3.36□□□□□ -1.87
PHF3-202ENST00000393387 FAM228BP0C875 321 aa3.36□□□□□ -1.87
PHF3-202ENST00000393387 ZNF705DP0CH99 300 aaPredicted RBP3.36□□□□□ -1.87
PHF3-202ENST00000393387 ZNF705BP0CI00 300 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms