RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.17■□□□□ 0.98
ME3-202ENST00000393324 PHF24Q9UPV7 400 aa21.17■□□□□ 0.98
ME3-202ENST00000393324 APOC4-APOC2K7ER74 178 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 SGK1O00141 431 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 APOC2P02655 101 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 MYZAPP0CAP1 466 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 ZSCAN5DPP0CG00 497 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 ADCY1Q08828 1119 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 PDK2Q15119 407 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 P3H1Q32P28 736 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 ZC3H12AQ5D1E8 599 aaKnown RBP21.16■□□□□ 0.98
ME3-202ENST00000393324 IZUMO3Q5VZ72 239 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 CD300LGQ6UXG3 332 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 FAM35AQ86V20 835 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 MYCBPAPQ8TBZ2 947 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 FAM149B1Q96BN6 582 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 UROC1Q96N76 676 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 SNRNP25Q9BV90 132 aaKnown RBP21.16■□□□□ 0.98
ME3-202ENST00000393324 TMBIM4Q9HC24 238 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 AAASQ9NRG9 546 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 TRIM17Q9Y577 477 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 AP1G2O75843 785 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 EOMESO95936 686 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 ETS1P14921 441 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 NDUFV1P49821 464 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 MRPS5P82675 430 aaKnown RBP21.16■□□□□ 0.98
ME3-202ENST00000393324 DENND2CQ68D51 928 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 METTL23Q86XA0 190 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 SH3TC2Q8TF17 1288 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.16■□□□□ 0.98
ME3-202ENST00000393324 CENPHQ9H3R5 247 aa21.16■□□□□ 0.98
ME3-202ENST00000393324 MDM4O15151 490 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 PECAM1P16284 738 aaPredicted RBP21.15■□□□□ 0.98
ME3-202ENST00000393324 CHKAP35790 457 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 MATKP42679 507 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 ATXN1P54253 815 aaKnown RBP21.15■□□□□ 0.98
ME3-202ENST00000393324 IFFO1Q0D2I5 559 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 SLC29A2Q14542 456 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 GLB1LQ6UWU2 654 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 SIX6OS1Q8N1H7 587 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 SH2D3CQ8N5H7 860 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 LINC01599Q8WXQ3 324 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 RTP3Q9BQQ7 232 aa21.15■□□□□ 0.98
ME3-202ENST00000393324 INPPL1O15357 1258 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 IFNB1P01574 187 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 CYP11A1P05108 521 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 NUDT17P0C025 328 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 IL4RP24394 825 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 EIF3BP55884 814 aaKnown RBP21.14■□□□□ 0.98
ME3-202ENST00000393324 TFDP2Q14188 446 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 CA9Q16790 459 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 DEFB106AQ8N104 65 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 ATP6V1G3Q96LB4 118 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 RNF157Q96PX1 679 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 KCNK16Q96T55 309 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 SMOQ99835 787 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 PCDH18Q9HCL0 1135 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 TSC2P49815 1807 aa21.14■□□□□ 0.98
ME3-202ENST00000393324 M0QZQ0 153 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 ITGB1P05556 798 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 YY1P25490 414 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 TKTL1P51854 596 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 RABGGTBP53611 331 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 YWHAZP63104 245 aaKnown RBP21.14■□□□□ 0.97
ME3-202ENST00000393324 GPS1Q13098 491 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 ERMARDQ5T6L9 678 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 DCLRE1AQ6PJP8 1040 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 SPATA18Q8TC71 538 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.14■□□□□ 0.97
ME3-202ENST00000393324 RSPH1Q8WYR4 309 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 ACBD6Q9BR61 282 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 C10orf88Q9H8K7 445 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 DSEQ9UL01 958 aa21.14■□□□□ 0.97
ME3-202ENST00000393324 SHBGP04278 402 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 PAX3P23760 479 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 LMAN1P49257 510 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 EIF3EP60228 445 aaKnown RBP21.13■□□□□ 0.97
ME3-202ENST00000393324 DCAF6Q58WW2 860 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 UBAP2Q5T6F2 1119 aaKnown RBP21.13■□□□□ 0.97
ME3-202ENST00000393324 HIBCHQ6NVY1 386 aaPredicted RBP21.13■□□□□ 0.97
ME3-202ENST00000393324 LRRC8DQ7L1W4 858 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 STRADAQ7RTN6 431 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 ADAM7Q9H2U9 754 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 PCDH9Q9HC56 1237 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 TMEM30AQ9NV96 361 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 CWC15Q9P013 229 aaKnown RBP21.13■□□□□ 0.97
ME3-202ENST00000393324 HMGB1P1B2RPK0 211 aaPredicted RBP21.13■□□□□ 0.97
ME3-202ENST00000393324 F8W810 466 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 MCF2LO15068 1137 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 RIPK2O43353 540 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 CACNA2D1P54289 1103 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 FAM189BP81408 668 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 SLC25A52Q3SY17 297 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 PPP6R3Q5H9R7 873 aaPredicted RBP21.13■□□□□ 0.97
ME3-202ENST00000393324 CLLU1OSQ5K130 101 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 NPNTQ6UXI9 565 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 ZMIZ2Q8NF64 920 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 SAGE1Q9NXZ1 904 aa21.13■□□□□ 0.97
ME3-202ENST00000393324 MYO1CO00159 1063 aa21.12■□□□□ 0.97
ME3-202ENST00000393324 DNALI1O14645 258 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms