RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SLC12A2P55011 1212 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 TIRAPP58753 221 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 SP2Q02086 613 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 CFHR3Q02985 330 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 LMAN2Q12907 356 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 STK3Q13188 491 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 CTBP1Q13363 440 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 STIM1Q13586 685 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ARHGEF7Q14155 803 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 LARS2Q15031 903 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 TTF1Q15361 905 aaPredicted RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 CYP1B1Q16678 543 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF750Q32MQ0 723 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 MINDY4Q4G0A6 757 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 RNASE12Q5GAN4 147 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 MEX3CQ5U5Q3 659 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 DCAF12L1Q5VU92 463 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 DAB2IPQ5VWQ8 1189 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 CXorf57Q6NSI4 855 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 KIAA1161Q6NSJ0 714 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 PDXDC1Q6P996 788 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF793Q6ZN11 406 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 MAEAQ7L5Y9 396 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 BCDIN3DQ7Z5W3 292 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF280BQ86YH2 543 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 P3H2Q8IVL5 708 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 SAMD14Q8IZD0 417 aaPredicted RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 FSTL5Q8N475 847 aaPredicted RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ARFGAP1Q8N6T3 406 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 C12orf76Q8N812 135 aaPredicted RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 PNPLA1Q8N8W4 532 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 FAM71DQ8N9W8 422 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 MAFAQ8NHW3 353 aaPredicted RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 DNAJB14Q8TBM8 379 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 JPH3Q8WXH2 748 aaPredicted RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 COQ8BQ96D53 544 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 LYZL4Q96KX0 146 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 NLRP4Q96MN2 994 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 SIGLEC11Q96RL6 698 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ADGRE3Q9BY15 652 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 TRIM5Q9C035 493 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 LRRC27Q9C0I9 530 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 SPRTNQ9H040 489 aaPredicted RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 DHX36Q9H2U1 1008 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 USP29Q9HBJ7 922 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF287Q9HBT7 754 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 XPNPEP3Q9NQH7 507 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 C1orf112Q9NSG2 853 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 MTMR4Q9NYA4 1195 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 AFF4Q9UHB7 1163 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 TCEAL9Q9UHQ7 104 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 IPO11Q9UI26 975 aaKnown RBP1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 ITGB1BP2Q9UKP3 347 aa1.6□□□□□ -2.15
SNORD28B-201ENST00000390993 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 TCRBV5S1A1TA0A578 114 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 GOLGA6CA6NDK9 693 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 GOLGA6BA6NDN3 693 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CD8B2A6NJW9 211 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 A8MVJ9 347 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 F8W810 466 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 RAB27BO00194 218 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CLIC1O00299 241 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 FOXN3O00409 490 aaPredicted RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 EXOC5O00471 708 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 PRPF3O43395 683 aaKnown RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 FRS3O43559 492 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 RFPL1O75677 317 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 ABLIM3O94929 683 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 VNN1O95497 513 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 MAP4K4O95819 1239 aaPredicted RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CRYABP02511 175 aaKnown RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 GOLGA6DP0CG33 693 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 TMEM225BP0DP42 221 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 PRF1P14222 555 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 IDEP14735 1019 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 NPR1P16066 1061 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 RPL17P18621 184 aaKnown RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 ADRA1DP25100 572 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 ACVR2AP27037 513 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 UQCRC1P31930 480 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CCKBRP32239 447 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 DIO1P49895 249 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CPT1AP50416 773 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 SUMO3P55854 103 aaPredicted RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 EIF4A1P60842 406 aaKnown RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CCDC15Q0P6D6 951 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 SEMA3AQ14563 771 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF267Q14586 743 aaPredicted RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CLCA4Q14CN2 919 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 MFSD13AQ14CX5 517 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 LY6KQ17RY6 165 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 MIDNQ504T8 468 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 ARHGAP29Q52LW3 1261 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 GLE1Q53GS7 698 aaKnown RBP1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 KLHL22Q53GT1 634 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 MANEAQ5SRI9 462 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 TMTC4Q5T4D3 741 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 C10orf25Q5T742 122 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 RUSC1-AS1Q66K80 236 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 DARS2Q6PI48 645 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms