RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 NEK2P51955 445 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TIRAPP58753 221 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TIAL1Q01085 375 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 SLC14A1Q13336 389 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 RAB32Q13637 225 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MFSD13AQ14CX5 517 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CACHD1Q5VU97 1274 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 VSTM1Q6UX27 236 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZDHHC24Q6UX98 284 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 KCTD20Q7Z5Y7 419 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 COL23A1Q86Y22 540 aaPredicted RBP3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PELI3Q8N2H9 469 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PPP1R35Q8TAP8 253 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MAML1Q92585 1016 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 HOOK2Q96ED9 719 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TRIM5Q9C035 493 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 HIPK2Q9H2X6 1198 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PCDH12Q9NPG4 1184 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 AASDHPPTQ9NRN7 309 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 HOMER2Q9NSB8 354 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 GAR1Q9NY12 217 aaKnown RBP3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MGAT4CQ9UBM8 478 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ANKRD6Q9Y2G4 727 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 COL4A3BPQ9Y5P4 624 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CLIC1O00299 241 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CD3EAPO15446 510 aaKnown RBP3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 RGS10O43665 173 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 AP1G1O43747 822 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TBC1D4O60343 1298 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 RASAL1O95294 804 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 HGFP14210 728 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 EN2P19622 333 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TNFRSF1BP20333 461 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MCM5P33992 734 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CFHR3Q02985 330 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MTX1Q13505 466 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 SLC9C1Q4G0N8 1177 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TMEM63BQ5T3F8 832 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 DAB2IPQ5VWQ8 1189 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZNF549Q6P9A3 640 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 DLK2Q6UY11 383 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 RBMXL3Q8N7X1 1067 aaKnown RBP3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 OR56A3Q8NH54 315 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZBTB45Q96K62 511 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PPP1R9BQ96SB3 815 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TRMOQ9BU70 441 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZNF518BQ9C0D4 1074 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 XPNPEP3Q9NQH7 507 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MAFFQ9ULX9 164 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PROCRQ9UNN8 238 aa3.13□□□□□ -1.91
RNU6-1040P-201ENST00000383974 H7C4K7 107 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 AGPSO00116 658 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 EXOC5O00471 708 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 RRP9O43818 475 aaKnown RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CT47B1P0C2W7 299 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CDKN2AP42771 156 aaKnown RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 NPY5RQ15761 445 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 INSCQ1MX18 579 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZNF750Q32MQ0 723 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 UBAP2Q5T6F2 1119 aaKnown RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 LVRNQ6Q4G3 990 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZNF793Q6ZN11 406 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 C16orf71Q8IYS4 520 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MMP21Q8N119 569 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 IL31RAQ8NI17 732 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MPLKIPQ8TAP9 179 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 WIPF2Q8TF74 440 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 SPSB4Q96A44 273 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 EDC3Q96F86 508 aaKnown RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 KAZALD1Q96I82 304 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 HIC2Q96JB3 615 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ACO2Q99798 780 aaKnown RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 RHOBTB2Q9BYZ6 727 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ATP6V0A4Q9HBG4 840 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 NMRK2Q9NPI5 230 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TRIM36Q9NQ86 728 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 A1CFQ9NQ94 594 aaKnown RBP3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ASAP1Q9ULH1 1129 aa3.12□□□□□ -1.91
RNU6-1040P-201ENST00000383974 LOC102723971A0A1B0GUV8 181 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TBX3O15119 743 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PHGDHO43175 533 aaKnown RBP3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CCP110O43303 1012 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TACR3P29371 465 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 SLC7A1P30825 629 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CPA2P48052 419 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PTDSS1P48651 473 aaKnown RBP3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PGDP52209 483 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ITGA8P53708 1063 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 HSF1Q00613 529 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 DEUP1Q05D60 604 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 KPNB1Q14974 876 aaKnown RBP3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 B3GNT9Q6UX72 402 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 UBE2Q1Q7Z7E8 422 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MICU3Q86XE3 530 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 METTL25Q8N6Q8 603 aa3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 C12orf76Q8N812 135 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1040P-201ENST00000383974 THOC3Q96J01 351 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms