RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ZMIZ2Q8NF64 920 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 SCAMP5Q8TAC9 235 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 FBXO32Q969P5 355 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 E2F7Q96AV8 911 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 RSPRY1Q96DX4 576 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 KREMEN1Q96MU8 473 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 SLITRK1Q96PX8 696 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TRMT61BQ9BVS5 477 aaKnown RBP9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TTLL2Q9BWV7 592 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 DUSP16Q9BY84 665 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 NAT10Q9H0A0 1025 aaKnown RBP9.76□□□□□ -0.85
HMGN1-202ENST00000380747 VPS16Q9H269 839 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 NDST4Q9H3R1 872 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TRPV4Q9HBA0 871 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 CSNK1G1Q9HCP0 422 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 FANCLQ9NW38 375 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 DLL3Q9NYJ7 618 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 DOCK6Q96HP0 2047 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 TRAV19A0A0A6YYK7 116 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 GTPBP10A4D1E9 387 aaKnown RBP9.75□□□□□ -0.85
HMGN1-202ENST00000380747 C2orf78A6NCI8 922 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 ZNF840PA6NDX5 716 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-202ENST00000380747 TNFRSF10BO14763 440 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 LETM1O95202 739 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-202ENST00000380747 PRAMEF12O95522 483 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CALCAP01258 141 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CKMP06732 381 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 VDRP11473 427 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 PSMC3P17980 439 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CDK11BP21127 795 aaKnown RBP9.75□□□□□ -0.85
HMGN1-202ENST00000380747 RFX1P22670 979 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 PON1P27169 355 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 GDI1P31150 447 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 USP8P40818 1118 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 MFAP3P55082 362 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 SLC8A3P57103 927 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 ARHGAP44Q17R89 818 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 MIIPQ5JXC2 388 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CDKAL1Q5VV42 579 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 ARHGAP17Q68EM7 881 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 DESI1Q6ICB0 168 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 ZC3H14Q6PJT7 736 aaKnown RBP9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CLEC20AQ6ZU45 233 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 GPRIN1Q7Z2K8 1008 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CMTM8Q8IZV2 173 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 SIX5Q8N196 739 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 AOPEPQ8N6M6 819 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CELF5Q8N6W0 485 aaKnown RBP9.75□□□□□ -0.85
HMGN1-202ENST00000380747 ARL14EPQ8N8R7 260 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-202ENST00000380747 PDZD8Q8NEN9 1154 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 ANKRD20A12PQ8NF67 263 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 EPS8L1Q8TE68 723 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 DEPDC1BQ8WUY9 529 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 CYP2S1Q96SQ9 504 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 BRD9Q9H8M2 597 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 SLC2A4RGQ9NR83 387 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 HESX1Q9UBX0 185 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 ZMYM5Q9UJ78 669 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 NCANO14594 1321 aa9.75□□□□□ -0.85
HMGN1-202ENST00000380747 SYCE3A1L190 88 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 SOBPA7XYQ1 873 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 HHLA1C9JL84 531 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 ZNF263O14978 683 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 PAEPP09466 180 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 USP17L7P0C7H9 530 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 HDCP19113 662 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
HMGN1-202ENST00000380747 PPP3CCP48454 512 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 PFKPQ01813 784 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 KRT31Q15323 416 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 NYAP1Q6ZVC0 841 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 ENOSF1Q7L5Y1 443 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 TTC30AQ86WT1 665 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 MFSD6LQ8IWD5 586 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 ANKRD52Q8NB46 1076 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 UBA3Q8TBC4 463 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 BPIFB1Q8TDL5 484 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 TFAP2BQ92481 460 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 RUBCNQ92622 972 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 USP13Q92995 863 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-202ENST00000380747 FAM81BQ96LP2 452 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 LSM14BQ9BX40 385 aaKnown RBP9.74□□□□□ -0.85
HMGN1-202ENST00000380747 FBXO44Q9H4M3 255 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 TDP1Q9NUW8 608 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 THG1LQ9NWX6 298 aaKnown RBP9.74□□□□□ -0.85
HMGN1-202ENST00000380747 COMMD8Q9NX08 183 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 OBP2AQ9NY56 170 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 GMIPQ9P107 970 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 APEX2Q9UBZ4 518 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 CHORDC1Q9UHD1 332 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-202ENST00000380747 DNAJC12Q9UKB3 198 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 TSPAN16Q9UKR8 245 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 KIAA1257Q9ULG3 409 aa9.74□□□□□ -0.85
HMGN1-202ENST00000380747 DOCK8Q8NF50 2099 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 KRBA1A5PL33 1030 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 SMTNL1A8MU46 457 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 O00370 1275 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 CYP26A1O43174 497 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 WEE1P30291 646 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms