RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 AP1G2O75843 785 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 CYP11A1P05108 521 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 ZSCAN5DPP0CG00 497 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 RARGP13631 454 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 IL4RP24394 825 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 CDK7P50613 346 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 FAM189BP81408 668 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 CAV1Q03135 178 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 KRT81Q14533 505 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 KCTD16Q68DU8 428 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 GLB1LQ6UWU2 654 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 CCDC25Q86WR0 208 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 METTL23Q86XA0 190 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 DEFB106AQ8N104 65 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 ZNF784Q8NCA9 323 aaPredicted RBP20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 BBOF1Q8ND07 529 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 EXOC4Q96A65 974 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 FAM149B1Q96BN6 582 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 KCNK16Q96T55 309 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 SMOQ99835 787 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 FRMD8P1Q9BZ68 369 aaPredicted RBP20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 AAASQ9NRG9 546 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 SAGE1Q9NXZ1 904 aa20.73■□□□□ 0.91
PDLIM5-205ENST00000380180 NLRC5Q86WI3 1866 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 F8W810 466 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 APOC4-APOC2K7ER74 178 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 MDM4O15151 490 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 APOC2P02655 101 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 PECAM1P16284 738 aaPredicted RBP20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 YY1P25490 414 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 MATKP42679 507 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 TKTL1P51854 596 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 CA9Q16790 459 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 P3H1Q32P28 736 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 IZUMO3Q5VZ72 239 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 DCLRE1AQ6PJP8 1040 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 LRRC8DQ7L1W4 858 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 CCHCR1Q8TD31 782 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 RSPH1Q8WYR4 309 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 RNF157Q96PX1 679 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 ACBD6Q9BR61 282 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 UNC93B1Q9H1C4 597 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 TMBIM4Q9HC24 238 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 TMEM30AQ9NV96 361 aa20.72■□□□□ 0.91
PDLIM5-205ENST00000380180 SGK1O00141 431 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 CHKAP35790 457 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 CACNA2D1P54289 1103 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 YWHAZP63104 245 aaKnown RBP20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 CLLU1OSQ5K130 101 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 ERMARDQ5T6L9 678 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 ZNF280BQ86YH2 543 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 SIX6OS1Q8N1H7 587 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 ZMIZ2Q8NF64 920 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 FAM76AQ8TAV0 307 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 SPATA18Q8TC71 538 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 C10orf88Q9H8K7 445 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 PCDH18Q9HCL0 1135 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 B4GALT3O60512 393 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 DDHD2O94830 711 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 MYCP01106 439 aaPredicted RBP20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 SELPP16109 830 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 PAX3P23760 479 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 SLC29A2Q14542 456 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 UBAP2Q5T6F2 1119 aaKnown RBP20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 ADAM7Q9H2U9 754 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 CALCOCO1Q9P1Z2 691 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 DSEQ9UL01 958 aa20.71■□□□□ 0.91
PDLIM5-205ENST00000380180 GOLGA6L10A6NI86 522 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 IFNB1P01574 187 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 MYZAPP0CAP1 466 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 TFDP2Q14188 446 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 SLC25A52Q3SY17 297 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 DCAF6Q58WW2 860 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 ANKRD20A8PQ5CZ79 823 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 DENND2CQ68D51 928 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 FAM171BQ6P995 826 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 NPNTQ6UXI9 565 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 STRADAQ7RTN6 431 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 SH2D3CQ8N5H7 860 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 SUSD3Q96L08 255 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 DNM1LO00429 736 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 DAB1O75553 588 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 SHBGP04278 402 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 NUDT17P0C025 328 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 EIF3BP55884 814 aaKnown RBP20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 EIF3EP60228 445 aaKnown RBP20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 GPS1Q13098 491 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 NOMO2Q5JPE7 1267 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 OVOS1Q6IE37 1185 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 HIBCHQ6NVY1 386 aaPredicted RBP20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 FAM126BQ8IXS8 530 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 SMARCD1Q96GM5 515 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 ATP6V1G3Q96LB4 118 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 PWWP2AQ96N64 755 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 FTHL17Q9BXU8 183 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 RHOBTB2Q9BYZ6 727 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 TSPYL1Q9H0U9 437 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 CENPHQ9H3R5 247 aa20.7■□□□□ 0.9
PDLIM5-205ENST00000380180 LRRC4CQ9HCJ2 640 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms