RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 GDF10P55107 478 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 FASTKD3Q14CZ7 662 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 SOWAHAQ2M3V2 549 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 FBXO47Q5MNV8 452 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 C14orf80Q86SX3 495 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 TRIB2Q92519 343 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 CLIP3Q96DZ5 547 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 PIH1D1Q9NWS0 290 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 USP18Q9UMW8 372 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 IPPQ9Y573 584 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 TRPA1O75762 1119 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 KIAA0754O94854 1291 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 TJP3O95049 919 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 FGFR1P11362 822 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 CREB1P16220 341 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 GPD2P43304 727 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 FKBP1BP68106 108 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 NME3Q13232 169 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 RCN1Q15293 331 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 HADHQ16836 314 aaKnown RBP11.28□□□□□ -0.6
NEDD9-201ENST00000379433 STKLD1Q8NE28 680 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 TRPV1Q8NER1 839 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 RSAD2Q8WXG1 361 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 RHOBTB2Q9BYZ6 727 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 VPS37BQ9H9H4 285 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 SAYSD1Q9NPB0 183 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 PCYOX1Q9UHG3 505 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 NME7Q9Y5B8 376 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 H7C0C1 242 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 PRPSAP2O60256 369 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 HSPA6P17066 643 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 ATP5OP48047 213 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 BSPRYQ5W0U4 402 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 WSCD1Q658N2 575 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 ST3GAL5Q9UNP4 418 aa11.28□□□□□ -0.6
NEDD9-201ENST00000379433 MANSC4A6NHS7 340 aaPredicted RBP11.27□□□□□ -0.6
NEDD9-201ENST00000379433 KPNA7A9QM74 516 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 H0Y3Z8 333 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 HUS1O60921 280 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.6
NEDD9-201ENST00000379433 TNFRSF8P28908 595 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 MORN1Q5T089 497 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 C9orf57Q5W0N0 161 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.6
NEDD9-201ENST00000379433 FAM131BQ86XD5 332 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 WDR75Q8IWA0 830 aaKnown RBP11.27□□□□□ -0.6
NEDD9-201ENST00000379433 IER2Q9BTL4 223 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.6
NEDD9-201ENST00000379433 EVLQ9UI08 416 aaPredicted RBP11.27□□□□□ -0.6
NEDD9-201ENST00000379433 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.6
NEDD9-201ENST00000379433 KIAA0100Q14667 2235 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 F8W810 466 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PSTPIP1O43586 416 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 CD52P31358 61 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 GRM5P41594 1212 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 NDUFV1P49821 464 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 SCNN1GP51170 649 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 CAP1Q01518 475 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 TRNP1Q6NT89 227 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 SPATA21Q7Z572 469 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 ZNF410Q86VK4 478 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 LINC01465Q8N7H1 131 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 APPL2Q8NEU8 664 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 EXD1Q8NHP7 514 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 SPATA18Q8TC71 538 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 FAM172AQ8WUF8 416 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 DYDC1Q8WWB3 177 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 SNF8Q96H20 258 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 BCO2Q9BYV7 579 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PABPC3Q9H361 631 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 DHX35Q9H5Z1 703 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 RASGRF2O14827 1237 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 LSM8O95777 96 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 BCAR1P56945 870 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PURAQ00577 322 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PEX5LQ8IYB4 626 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 ZBED8Q8IZ13 594 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 UBR7Q8N806 425 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 GDAP1Q8TB36 358 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 USP6NLQ92738 828 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 RBM41Q96IZ5 413 aaKnown RBP11.27□□□□□ -0.61
NEDD9-201ENST00000379433 VCPIP1Q96JH7 1222 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 SNX27Q96L92 541 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 PEBP4Q96S96 227 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 RBM15Q96T37 977 aaKnown RBP eCLIP11.27□□□□□ -0.611e-6■■■□□ 19.2
NEDD9-201ENST00000379433 LRRC19Q9H756 370 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 TMBIM4Q9HC24 238 aa11.27□□□□□ -0.61
NEDD9-201ENST00000379433 CNTN6Q9UQ52 1028 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms