RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PYGBP11216 843 aa13.67□□□□□ -0.22
NPHP4-203ENST00000378169 KRT80Q6KB66 452 aa13.67□□□□□ -0.22
NPHP4-203ENST00000378169 ERVK-5Q9HDB9 667 aa13.67□□□□□ -0.22
NPHP4-203ENST00000378169 SCOCQ9UIL1 159 aa13.67□□□□□ -0.22
NPHP4-203ENST00000378169 SDR42E2A6NKP2 422 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 SMIM24O75264 130 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 RBL1P28749 1068 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 GLRBP48167 497 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 USP50Q70EL3 339 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 LCA5Q86VQ0 697 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 DAW1Q8N136 415 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 BTBD7Q9P203 1132 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 ZBTB24O43167 697 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 USP12O75317 370 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 SETSIPP0DME0 302 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 ARF4P18085 180 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 PSEN2P49810 448 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 HIRAP54198 1017 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 MAPRE1Q15691 268 aaKnown RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 ERMARDQ5T6L9 678 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 CES3Q6UWW8 571 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 COLGALT1Q8NBJ5 622 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 VCX3AQ9NNX9 186 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 MTSS1O43312 755 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 EFEMP1Q12805 493 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 PKN2Q16513 984 aaKnown RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 FSCN1Q16658 493 aaKnown RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 KCNT2Q6UVM3 1135 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 MUC3BQ9H195 1237 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 HEY2Q9UBP5 337 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 ENDOD1O94919 500 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 F9P00740 461 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 ENO3P13929 434 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 TMCO4Q5TGY1 634 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 OVOS1Q6IE37 1185 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 NPNTQ6UXI9 565 aa13.66□□□□□ -0.22
NPHP4-203ENST00000378169 MYCBPQ99417 103 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 ZNF214Q9UL59 606 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-203ENST00000378169 NFKBIEO00221 500 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 TPH1P17752 444 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 KDELR1P24390 212 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 SOX11P35716 441 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 FLT3P36888 993 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 NLRP9Q7RTR0 991 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 SLC26A11Q86WA9 606 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 C12orf56Q8IXR9 622 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 UNKQ9C0B0 810 aaKnown RBP13.65□□□□□ -0.22
NPHP4-203ENST00000378169 XPNPEP1Q9NQW7 623 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-203ENST00000378169 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 COL14A1Q05707 1796 aaKnown RBP13.65□□□□□ -0.22
NPHP4-203ENST00000378169 BAZ2AQ9UIF9 1905 aaKnown RBP13.65□□□□□ -0.22
NPHP4-203ENST00000378169 NCANO14594 1321 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 MYPNQ86TC9 1320 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 RBAK-RBAKDNI3L0D1 243 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 AIM2O14862 343 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-203ENST00000378169 FDFT1P37268 417 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 AVPR1AP37288 418 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 RTP1P59025 263 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 MMRN1Q13201 1228 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 HAO1Q9UJM8 370 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 COG5Q9UP83 839 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 CNTNAP2Q9UHC6 1331 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 SLIT2O94813 1529 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 TCRBV7S2A1N4TA0A589 114 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 GSTA4O15217 222 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 LHX1P48742 406 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 SLC6A3Q01959 620 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 CNGA2Q16280 664 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 ZNF410Q86VK4 478 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 LRRC43Q8N309 656 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 GANCQ8TET4 914 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 KAT2BQ92831 832 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
NPHP4-203ENST00000378169 DDX20Q9UHI6 824 aaKnown RBP13.65□□□□□ -0.22
NPHP4-203ENST00000378169 BTNL10A8MVZ5 291 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 KIF3CO14782 793 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 UBOX5O94941 541 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 MYL2P10916 166 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 AKR1A1P14550 325 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 ALDH7A1P49419 539 aaKnown RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 PDAP1Q13442 181 aaKnown RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 HIC1Q14526 733 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 EFTUD2Q15029 972 aaKnown RBP eCLIP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 WSCD1Q658N2 575 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms