RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SLC12A1Q13621 1099 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 MYBPC2Q14324 1141 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 TFAP2DQ7Z6R9 452 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 LONP2Q86WA8 852 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 STMN2Q93045 179 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 PABPC5Q96DU9 382 aaKnown RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 FAM193BQ96PV7 902 aaPredicted RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 SPON2Q9BUD6 331 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 KRT82Q9NSB4 513 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 SLC5A4Q9NY91 659 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 ZFP69BQ9UJL9 534 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 PHTF1Q9UMS5 762 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 FSCN2O14926 492 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 LGR5O75473 907 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 SMPD1P17405 629 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 CYP2F1P24903 491 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 SCNN1GP51170 649 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 RAD23BP54727 409 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
DDR1-227ENST00000376570 CNGA2Q16280 664 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 KCNT2Q6UVM3 1135 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 GPR142Q7Z601 462 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 ZDHHC18Q9NUE0 388 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 AP4E1Q9UPM8 1137 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
DDR1-227ENST00000376570 ASAP2O43150 1006 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 SMIM24O75264 130 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 HOXC6P09630 235 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 KCNA4P22459 653 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 GRIK1P39086 918 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 POLE2P56282 527 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
DDR1-227ENST00000376570 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 MTDHQ86UE4 582 aaKnown RBP12.13□□□□□ -0.47
DDR1-227ENST00000376570 NUDCD3Q8IVD9 361 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 IPMKQ8NFU5 416 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 MOCOSQ96EN8 888 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 TTC1Q99614 292 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 SNRNP25Q9BV90 132 aaKnown RBP12.13□□□□□ -0.47
DDR1-227ENST00000376570 PSTPIP1O43586 416 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 TYK2P29597 1187 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 GBP1P32455 592 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 PBX3P40426 434 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 BRCC3P46736 316 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 RPL10AP62906 217 aaKnown RBP12.13□□□□□ -0.47
DDR1-227ENST00000376570 DPY19L2P1Q6NXN4 242 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 SDCCAG8Q86SQ7 713 aaPredicted RBP12.13□□□□□ -0.47
DDR1-227ENST00000376570 POU5F2Q8N7G0 328 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 KCNK16Q96T55 309 aa12.13□□□□□ -0.47
DDR1-227ENST00000376570 NT5C1B-RDH14C9J2C7 533 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 PLA2G6O60733 806 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ELNP15502 786 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 IGFBP6P24592 240 aaPredicted RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 OR1G1P47890 313 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 STAT4Q14765 748 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 FBXO47Q5MNV8 452 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 NOTUMQ6P988 496 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ZPBP2Q6X784 338 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ADGRF2Q8IZF7 708 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 SLC4A11Q8NBS3 891 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ZNF669Q96BR6 464 aaPredicted RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 NOP53Q9NZM5 478 aaKnown RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 hCG_1818297A0A087WSY0 165 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 GOLGA8QA0A0J9YX86 632 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 WDR27A2RRH5 827 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 GOLGA8OA6NCC3 632 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 DCAF8L1A6NGE4 600 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 GOLGA8NF8WBI6 632 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 TGFB3P10600 412 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ESRRAP11474 423 aaPredicted RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 BDNFP23560 247 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 TKTL1P51854 596 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 MPP2Q14168 576 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 SLC1A5Q15758 541 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 MTMR14Q8NCE2 650 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 MORC4Q8TE76 937 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ART4Q93070 314 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 TINF2Q9BSI4 451 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 PDZD7Q9H5P4 517 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 PCYOX1Q9UHG3 505 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 JCHAINP01591 159 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 TPI1P60174 286 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 LGSNQ5TDP6 509 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 MTHFD1LQ6UB35 978 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 B3GNT9Q6UX72 402 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 ZNF677Q86XU0 584 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 OR6P1Q8NGX9 317 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 IFT122Q9HBG6 1241 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 DDX56Q9NY93 547 aaKnown RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 TMEM59LQ9UK28 342 aa12.12□□□□□ -0.47
DDR1-227ENST00000376570 BARX2Q9UMQ3 279 aaPredicted RBP12.12□□□□□ -0.47
DDR1-227ENST00000376570 SCN7AQ01118 1682 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms