RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 NOMO1Q15155 1222 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 DARS2Q6PI48 645 aaKnown RBP13.98□□□□□ -0.17
CSTF2-201ENST00000372972 MICALCLQ6ZW33 695 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 SLC26A9Q7LBE3 791 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 RIBC1Q8N443 379 aaPredicted RBP13.98□□□□□ -0.17
CSTF2-201ENST00000372972 NAT8LQ8N9F0 302 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 SLC2A14Q8TDB8 520 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 CPT1BQ92523 772 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 CHMP6Q96FZ7 201 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 PHACTR1Q9C0D0 580 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 CTNNAL1Q9UBT7 734 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 CDY2AQ9Y6F7 541 aa13.98□□□□□ -0.17
CSTF2-201ENST00000372972 MYO1CO00159 1063 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 PTGESO14684 152 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 LCP1P13796 627 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 IL4RP24394 825 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 MAP2K2P36507 400 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 HDAC4P56524 1084 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 ROR1Q01973 937 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 PDIA2Q13087 525 aaKnown RBP13.97□□□□□ -0.17
CSTF2-201ENST00000372972 HIF1AQ16665 826 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 ANKRD20A8PQ5CZ79 823 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 ZC3H12AQ5D1E8 599 aaKnown RBP13.97□□□□□ -0.17
CSTF2-201ENST00000372972 CCSAPQ6IQ19 270 aaPredicted RBP13.97□□□□□ -0.17
CSTF2-201ENST00000372972 NPNTQ6UXI9 565 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 CPLX4Q7Z7G2 160 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 ZBED8Q8IZ13 594 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 CENPIQ92674 756 aaPredicted RBP13.97□□□□□ -0.17
CSTF2-201ENST00000372972 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
CSTF2-201ENST00000372972 PCDH18Q9HCL0 1135 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 TRPV2Q9Y5S1 764 aa13.97□□□□□ -0.17
CSTF2-201ENST00000372972 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.97□□□□□ -0.17
CSTF2-201ENST00000372972 C5orf60A6NFR6 353 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 TGM2P21980 687 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 ARL4CP56559 192 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 CORO7P57737 925 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 FASTKD3Q14CZ7 662 aaKnown RBP13.96□□□□□ -0.17
CSTF2-201ENST00000372972 MAP3K21Q5TCX8 1036 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 ZC3H18Q86VM9 953 aaKnown RBP13.96□□□□□ -0.17
CSTF2-201ENST00000372972 CYP4X1Q8N118 509 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 PLD5Q8N7P1 536 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 WNT8BQ93098 351 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 C11orf84Q9BUA3 381 aaPredicted RBP13.96□□□□□ -0.17
CSTF2-201ENST00000372972 SNRNP25Q9BV90 132 aaKnown RBP13.96□□□□□ -0.17
CSTF2-201ENST00000372972 CCDC134Q9H6E4 229 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 GPATCH2LQ9NWQ4 482 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 TBK1Q9UHD2 729 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 ST3GAL5Q9UNP4 418 aa13.96□□□□□ -0.17
CSTF2-201ENST00000372972 PDCD11Q14690 1871 aaKnown RBP13.96□□□□□ -0.17
CSTF2-201ENST00000372972 EXOC1LA0A1B0GW35 172 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 ZNF487B1APH4 448 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 GOLGA8MH3BSY2 632 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 H7C0C1 242 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 CYB561D2O14569 222 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 APOL1O14791 398 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 ATP5OP48047 213 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 SLC8A3P57103 927 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 EFHC1Q5JVL4 640 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 HP1BP3Q5SSJ5 553 aaPredicted RBP13.96□□□□□ -0.18
CSTF2-201ENST00000372972 ANKRD22Q5VYY1 191 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 C1orf228Q6PIY5 440 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 OSTM1Q86WC4 334 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 TDRPQ86YL5 185 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 HACE1Q8IYU2 909 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 RAET1EQ8TD07 263 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 ZFP42Q96MM3 310 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 ZNF317Q96PQ6 595 aaPredicted RBP13.96□□□□□ -0.18
CSTF2-201ENST00000372972 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.18
CSTF2-201ENST00000372972 PRMT1Q99873 361 aaKnown RBP13.96□□□□□ -0.18
CSTF2-201ENST00000372972 ZNF670Q9BS34 389 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 VPS37BQ9H9H4 285 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 CHST12Q9NRB3 414 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 EURLQ9NYK6 297 aa13.96□□□□□ -0.18
CSTF2-201ENST00000372972 ATXN2Q99700 1313 aaKnown RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 PCNTO95613 3336 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 TMEM120BA0PK00 339 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 XPO1O14980 1071 aaKnown RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 PTPN1P18031 435 aaKnown RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 TFE3P19532 575 aaPredicted RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 DRD4P21917 467 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 CST5P28325 142 aaPredicted RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 BCAR1P56945 870 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 HTRA3P83110 453 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 QPCTQ16769 361 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 CA9Q16790 459 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 SLC9A4Q6AI14 798 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 VSTM1Q6UX27 236 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 TADA2BQ86TJ2 420 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 SERINC5Q86VE9 423 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 PQLC3Q8N755 202 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 ZNF784Q8NCA9 323 aaPredicted RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 PCDH19Q8TAB3 1148 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 DUSP16Q9BY84 665 aa13.95□□□□□ -0.18
CSTF2-201ENST00000372972 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
CSTF2-201ENST00000372972 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms