RNA–Protein interactions for RNA: ENST00000372616.1

CTPS1-201, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-201ENST00000372616 SYCP3Q8IZU3 236 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 KLHL23Q8NBE8 558 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 CCDC110Q8TBZ0 833 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 APBB2Q92870 758 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 RBM15Q96T37 977 aaKnown RBP eCLIP7.52□□□□□ -1.21
CTPS1-201ENST00000372616 GSX2Q9BZM3 304 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 DCLK3Q9C098 648 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 TNKS2Q9H2K2 1166 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 BHMT2Q9H2M3 363 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 SLC38A10Q9HBR0 1119 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 UBE2TQ9NPD8 197 aaPredicted RBP7.52□□□□□ -1.21
CTPS1-201ENST00000372616 AGPAT3Q9NRZ7 376 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 IRAK4Q9NWZ3 460 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 TOR4AQ9NXH8 423 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.52□□□□□ -1.21
CTPS1-201ENST00000372616 HCN2Q9UL51 889 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 ZMYND8Q9ULU4 1186 aaPredicted RBP7.52□□□□□ -1.21
CTPS1-201ENST00000372616 SORCS3Q9UPU3 1222 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 GPC6Q9Y625 555 aaPredicted RBP7.52□□□□□ -1.21
CTPS1-201ENST00000372616 LOC285556D6RIA3 1793 aa7.52□□□□□ -1.21
CTPS1-201ENST00000372616 RBBP6Q7Z6E9 1792 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 H0Y3Z8 333 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ENPP3O14638 875 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 GDF9O60383 454 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 LRRN2O75325 713 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ENTPD5O75356 428 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 UPP2O95045 317 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 DLATP10515 647 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ESRRAP11474 423 aaPredicted RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 MAPK4P31152 587 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CDK7P50613 346 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 HMGCS2P54868 508 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 BPIFB4P59827 614 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 FAAP100Q0VG06 881 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 SF3A3Q12874 501 aaKnown RBP eCLIP7.51□□□□□ -1.211e-6■□□□□ 9.2
CTPS1-201ENST00000372616 UBE2SQ16763 222 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 TKFCQ3LXA3 575 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 USH1GQ495M9 461 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 HSP90AA5PQ58FG0 334 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 IZUMO3Q5VZ72 239 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 RINT1Q6NUQ1 792 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 AAGABQ6PD74 315 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 FASTKD5Q7L8L6 764 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ZNF720Q7Z2F6 126 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 TMPRSS6Q8IU80 811 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CCNJLQ8IV13 435 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 OR13H1Q8NG92 308 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 PSPC1Q8WXF1 523 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ZNF75CPQ92670 426 aaPredicted RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 NACC1Q96RE7 527 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 HAPLN3Q96S86 360 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 FRMD8P1Q9BZ68 369 aaPredicted RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ASCC2Q9H1I8 757 aaPredicted RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 EPB41L1Q9H4G0 881 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 RRAGCQ9HB90 399 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 MRPL47Q9HD33 250 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 TBK1Q9UHD2 729 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CCPG1Q9ULG6 757 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 SHOC2Q9UQ13 582 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 TTC36A6NLP5 189 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ANKRD63C9JTQ0 380 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CLDN3O15551 220 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CYP3A4P08684 503 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 POLR2MP0CAP2 368 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 SPATA31C1P0DKV0 1188 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CREB1P16220 341 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 GM2AP17900 193 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 SREBF1P36956 1147 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 KCNJ1P48048 391 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 VAMP7P51809 220 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ARFIP2P53365 341 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 GEMIN4P57678 1058 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CDK16Q00536 496 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CBWD6Q4V339 395 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 KHDC1Q4VXA5 237 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CBWD3Q5JTY5 395 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CBWD5Q5RIA9 395 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 ACAD10Q6JQN1 1059 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 TRIM72Q6ZMU5 477 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CATSPERGQ6ZRH7 1159 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 GSTA5Q7RTV2 222 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 MTDHQ86UE4 582 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CHSY1Q86X52 802 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 RHOT1Q8IXI2 618 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 RBM12BQ8IXT5 1001 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 C2orf69Q8N8R5 385 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CRYGNQ8WXF5 182 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 IRGQQ8WZA9 623 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 AZIN2Q96A70 460 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 SIKE1Q9BRV8 207 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 SPATA16Q9BXB7 569 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 CADM1Q9BY67 442 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 MLXIPLQ9NP71 852 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 FBXO28Q9NVF7 368 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 TAS2R14Q9NYV8 317 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 NOCTQ9UK39 431 aaKnown RBP7.51□□□□□ -1.21
CTPS1-201ENST00000372616 KCNH4Q9UQ05 1017 aa7.51□□□□□ -1.21
CTPS1-201ENST00000372616 A0A0G2JLL6 359 aaPredicted RBP7.5□□□□□ -1.21
CTPS1-201ENST00000372616 BTBD19C9JJ37 291 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms