RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 PCDHGC3Q9UN70 934 aa29.6■■■□□ 2.33
SDCCAG3-204ENST00000371725 ARL5CA6NH57 179 aa29.6■■■□□ 2.33
SDCCAG3-204ENST00000371725 SCNN1GP51170 649 aa29.6■■■□□ 2.33
SDCCAG3-204ENST00000371725 PAK6Q9NQU5 681 aaPredicted RBP29.6■■■□□ 2.33
SDCCAG3-204ENST00000371725 PARVAQ9NVD7 372 aa29.6■■■□□ 2.33
SDCCAG3-204ENST00000371725 LIASO43766 372 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 CYP3A5P20815 502 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 P3H1Q32P28 736 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 GSTA5Q7RTV2 222 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 RNF208Q9H0X6 261 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 IP6K2Q9UHH9 426 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 KPNA7A9QM74 516 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 RASA4BC9J798 803 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 DNALI1O14645 258 aaPredicted RBP29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 RASA4O43374 803 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 CCNB1P14635 433 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 MMP8P22894 467 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 FOXN2P32314 431 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 CYP4A22Q5TCH4 519 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 TRABD2AQ86V40 505 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 RBM41Q96IZ5 413 aaKnown RBP29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 DPEP3Q9H4B8 488 aa29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 DRG1Q9Y295 367 aaKnown RBP29.59■■■□□ 2.33
SDCCAG3-204ENST00000371725 FGFR1P11362 822 aa29.58■■■□□ 2.33
SDCCAG3-204ENST00000371725 LRRC38Q5VT99 294 aa29.58■■■□□ 2.33
SDCCAG3-204ENST00000371725 ACOT1Q86TX2 421 aa29.58■■■□□ 2.33
SDCCAG3-204ENST00000371725 TMEM35BQ8NCS4 154 aa29.58■■■□□ 2.33
SDCCAG3-204ENST00000371725 RMDN2Q96LZ7 410 aa29.58■■■□□ 2.33
SDCCAG3-204ENST00000371725 PRPF4O43172 522 aaKnown RBP eCLIP29.57■■■□□ 2.323e-7■■□□□ 12.1
SDCCAG3-204ENST00000371725 MICAL2O94851 1124 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 CCL5P13501 91 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 GCAP28676 217 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 WDR4P57081 412 aaKnown RBP29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 RGS9BPQ6ZS82 235 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 UBA3Q8TBC4 463 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 DENND1AQ8TEH3 1009 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 KBTBD7Q8WVZ9 684 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 FAM118BQ9BPY3 351 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 PAAF1Q9BRP4 392 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 NT5C1AQ9BXI3 368 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 STARD13Q9Y3M8 1113 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 XPOTO43592 962 aaKnown RBP29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 ASMTLO95671 621 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 MGAT5Q09328 741 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 ZKSCAN8Q15776 578 aaPredicted RBP29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 MRPL10Q7Z7H8 261 aaKnown RBP29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 RTN4RL1Q86UN2 441 aaPredicted RBP29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 OR6B3Q8NGW1 331 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 TBC1D31Q96DN5 1066 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 PITPNM3Q9BZ71 974 aa29.57■■■□□ 2.32
SDCCAG3-204ENST00000371725 LSM8O95777 96 aaKnown RBP29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 TAF6P49848 677 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 LILRA4P59901 499 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 N4BP2L2Q92802 583 aaPredicted RBP29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 SLITRK1Q96PX8 696 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 PPCSQ9HAB8 311 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 FAM49BQ9NUQ9 324 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 WBP1LQ9NX94 342 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 A0A0U1RQF3 1178 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 TJP3O95049 919 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 POMCP01189 267 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 PDGFRBP09619 1106 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 LMO2P25791 158 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 CDH5P33151 784 aaPredicted RBP29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 PTPN7P35236 360 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 CDK7P50613 346 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 RASA2Q15283 850 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 PTPN20Q4JDL3 420 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 ECHDC2Q86YB7 292 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 SAYSD1Q9NPB0 183 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 SENP1Q9P0U3 644 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 USTQ9Y2C2 406 aa29.56■■■□□ 2.32
SDCCAG3-204ENST00000371725 EXOC1LA0A1B0GW35 172 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 TMEM191CA6NGB0 347 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 CASTOR2A6NHX0 329 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 M0QYV0 167 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 THP07101 528 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 CCND1P24385 295 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 CLCNKBP51801 687 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 TMED2Q15363 201 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 ALLCQ8N6M5 410 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 AGAP11Q8TF27 550 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 LINC01599Q8WXQ3 324 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 ZNF560Q96MR9 790 aa29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 TSPYL2Q9H2G4 693 aaPredicted RBP29.55■■■□□ 2.32
SDCCAG3-204ENST00000371725 NDC80O14777 642 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 MED7O43513 233 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 KRT16P08779 473 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 VDRP11473 427 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 LRPAP1P30533 357 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 SSR1P43307 286 aaKnown RBP29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 RPL7AP62424 266 aaKnown RBP29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 FAM126BQ8IXS8 530 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 HACE1Q8IYU2 909 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 C3orf58Q8NDZ4 430 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 DNPEPQ9ULA0 475 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 INPP5FQ9Y2H2 1132 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 GIT1Q9Y2X7 761 aa29.54■■■□□ 2.32
SDCCAG3-204ENST00000371725 ZNF623O75123 536 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms