RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 IRF2BP1Q8IU81 584 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 ABTB1Q969K4 478 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CPB2Q96IY4 423 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 RPRD1AQ96P16 312 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CCDC90BQ9GZT6 254 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CXorf56Q9H5V9 222 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 DCLRE1BQ9H816 532 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 PIDD1Q9HB75 910 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 ZMYM2Q9UBW7 1377 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 PRRG1O14668 218 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 STX7O15400 261 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CELF2O95319 508 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 NR2C2P49116 596 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 SLC11A2P49281 568 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 ZNF410Q86VK4 478 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TMEM161BQ8NDZ6 487 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 WDR18Q9BV38 432 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TRIM45Q9H8W5 580 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 DYRK4Q9NR20 520 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 ZNF446Q9NWS9 450 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 NINJ2Q9NZG7 142 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 PCYOX1Q9UHG3 505 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 DDX20Q9UHI6 824 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 HAO1Q9UJM8 370 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 APOC4-APOC2K7ER74 178 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 AKAP10O43572 662 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 UBOX5O94941 541 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 APOC2P02655 101 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 SPATA31C1P0DKV0 1188 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 SNHG28P0DPA3 235 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 MAP4P27816 1152 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 SREBF2Q12772 1141 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 MPP3Q13368 585 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TMED1Q13445 227 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 LRRC36Q1X8D7 754 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TSEN2Q8NCE0 465 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CEP19Q96LK0 163 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 RMDN2Q96LZ7 410 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TEX12Q9BXU0 123 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 BRD8Q9H0E9 1235 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 ABHD16BQ9H3Z7 469 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 NCANO14594 1321 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 RCCD1A6NED2 376 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 SUPT3HB4E1H0 165 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 PLA2G6O60733 806 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 CDH2P19022 906 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 KCNA3P22001 575 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 ELK3P41970 407 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 RTP1P59025 263 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 KAT5Q92993 513 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 OSMRQ99650 979 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 GPR63Q9BZJ6 419 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 ACOT9Q9Y305 439 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 PKP3Q9Y446 797 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 RHOBTB1O94844 696 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 JCHAINP01591 159 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 RALBP11234 206 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 PTPRAP18433 802 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 AXLP30530 894 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 THPOP40225 353 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 AMPD2Q01433 879 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 NUDT18Q6ZVK8 323 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 IFNEQ86WN2 208 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 CCDC60Q8IWA6 550 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 SH3KBP1Q96B97 665 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 LRRC39Q96DD0 335 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 ZBTB45Q96K62 511 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 FOPNLQ96NB1 174 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 P2RX7Q99572 595 aaKnown RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 EFCAB1Q9HAE3 211 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 PRDM16Q9HAZ2 1276 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 KIF17Q9P2E2 1029 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 MOSPD1Q9UJG1 213 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 E2F8A0AVK6 867 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 WNT7AO00755 349 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 CYP1A2P05177 515 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 YWHAZP63104 245 aaKnown RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 CNTN2Q02246 1040 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 GRIK4Q16099 956 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 ZCCHC9Q8N567 271 aaKnown RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 GEMIN8Q9NWZ8 242 aaKnown RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 DNPEPQ9ULA0 475 aa12.24□□□□□ -0.45
DEPDC1-201ENST00000370966 C16orf96A6NNT2 1141 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 LYPLA2O95372 231 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 CPA3P15088 417 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 TKTL1P51854 596 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 FCGRTP55899 365 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 KCNK10P57789 538 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 PPATQ06203 517 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 FLOT2Q14254 428 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 CYTH1Q15438 398 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 UGT3A1Q6NUS8 523 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms