RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NRDCO43847 1150 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 CABYRO75952 493 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 SERPINC1P01008 464 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 PRKCBP05771 671 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 PYGMP11217 842 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 FGFR4P22455 802 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 EEF1GP26641 437 aaKnown RBP3.84□□□□□ -1.8
MCF2-202ENST00000370573 TMOD1P28289 359 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 IGFALSP35858 605 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 HK2P52789 917 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 EFNA5P52803 228 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 ERVFC1P60507 584 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 ERVK-21P61565 698 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 TFDP1Q14186 410 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 PCBP2Q15366 365 aaKnown RBP eCLIP3.84□□□□□ -1.8
MCF2-202ENST00000370573 PRSS53Q2L4Q9 553 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 TRIM71Q2Q1W2 868 aaKnown RBP3.84□□□□□ -1.8
MCF2-202ENST00000370573 PIK3R6Q5UE93 754 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 EEF1DP3Q658K8 133 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 SERINC5Q86VE9 423 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 TRIM59Q8IWR1 403 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 PJA1Q8NG27 643 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 PLEKHO2Q8TD55 490 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 LIN37Q96GY3 246 aaPredicted RBP3.84□□□□□ -1.8
MCF2-202ENST00000370573 ZNF333Q96JL9 665 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 KREMEN1Q96MU8 473 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 MAP7D2Q96T17 732 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.8
MCF2-202ENST00000370573 TUBGCP2Q9BSJ2 902 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 NFKBIZQ9BYH8 718 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 INO80BQ9C086 356 aaPredicted RBP3.84□□□□□ -1.8
MCF2-202ENST00000370573 TRPV6Q9H1D0 765 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 C2orf40Q9H1Z8 148 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 VPS16Q9H269 839 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 LUC7LQ9NQ29 371 aaKnown RBP3.84□□□□□ -1.8
MCF2-202ENST00000370573 TRMT13Q9NUP7 481 aaKnown RBP3.84□□□□□ -1.8
MCF2-202ENST00000370573 HSPBP1Q9NZL4 362 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 LMCD1Q9NZU5 365 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 EXOC7Q9UPT5 735 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 BRCA2P51587 3418 aa3.84□□□□□ -1.8
MCF2-202ENST00000370573 A0A0B4J269 797 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ACKR2O00590 384 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 RGS13O14921 159 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 HNRNPDLO14979 420 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 N4BP3O15049 544 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 FGFR1OPO95684 399 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 CRTAMO95727 393 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 MT-CO1P00395 513 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 CHRNA1P02708 482 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ADRB2P07550 413 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 GNAT1P11488 350 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PROZP22891 400 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 RPL13P26373 211 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 PSMC2P35998 433 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 PBX1P40424 430 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 MTIF2P46199 727 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 CDK7P50613 346 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 SNRPFP62306 86 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 GABREP78334 506 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 SPAG1Q07617 926 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 CYP4F3Q08477 520 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 MYBPC2Q14324 1141 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 KCNMB1Q16558 191 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PTGISQ16647 500 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM187BQ17R55 369 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 GRAMD1BQ3KR37 738 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 BBS9Q3SYG4 887 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 CCDC40Q4G0X9 1142 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM47CQ5HY64 1035 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ZBTB41Q5SVQ8 909 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 C1orf220Q5T0J3 134 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ACBD5Q5T8D3 534 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 CRELD2Q6UXH1 353 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 FRMD5Q7Z6J6 570 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ZNF410Q86VK4 478 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 CDR2LQ86X02 465 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 CBWD2Q8IUF1 395 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ZBTB8OSQ8IWT0 167 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 BVESQ8NE79 360 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ADCY4Q8NFM4 1077 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 GOLGA5Q8TBA6 731 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 SAAL1Q96ER3 474 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ALPK1Q96QP1 1244 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 GPATCH2Q9NW75 528 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 CGNQ9P2M7 1197 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM50BQ9Y247 325 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 RPS6KL1Q9Y6S9 549 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PHLPP2Q6ZVD8 1323 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 A0A0U1RQG5 324 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 ZNF503-AS2A6NEH8 195 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 LGALS16A8MUM7 142 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ARVCFO00192 962 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 DNM1LO00429 736 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 SLC16A3O15427 465 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 MEFVO15553 781 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM189A1O60320 539 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 TSPAN1O60635 241 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 EXOC3O60645 756 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms