RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NT5C3AQ9H0P0 336 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 AZI2Q9H6S1 392 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 UBE2ZQ9H832 354 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 RNPEPL1Q9HAU8 725 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 BMP2KQ9NSY1 1161 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 IL1RAPL1Q9NZN1 696 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PKD2L1Q9P0L9 805 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 STIM2Q9P246 746 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TECTAO75443 2155 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 HTR3EA5X5Y0 456 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TISP43B9A030 160 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TNFRSF10BO14763 440 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 GSTT1P30711 240 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 KCNQ1P51787 676 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF132P52740 706 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 GEMIN4P57678 1058 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TSR1Q2NL82 804 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 HAUS3Q68CZ6 603 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 GPR149Q86SP6 731 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ADHFE1Q8IWW8 467 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 SH2D3CQ8N5H7 860 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ADAMTS19Q8TE59 1207 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 LPPQ93052 612 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ZBTB45Q96K62 511 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CEP170P1Q96L14 293 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 MYRFLQ96LU7 910 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CEP295NLQ96MC4 621 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TMEM237Q96Q45 408 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 NR1H4Q96RI1 486 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 HNRNPABQ99729 332 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PYM1Q9BRP8 204 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 GCOM2Q9BZD3 368 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 RAB17Q9H0T7 212 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 FAM124BQ9H5Z6 455 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CSNK1G1Q9HCP0 422 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TCEAL9Q9UHQ7 104 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 LRCH1Q9Y2L9 728 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PPEF2O14830 753 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 TTI1O43156 1089 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 FLT3P36888 993 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 ZXDBP98169 803 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 CAMK2BQ13554 666 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 CNPY1Q3B7I2 92 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 NOMO2Q5JPE7 1267 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 CENPPQ6IPU0 288 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 NOTUMQ6P988 496 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 UNC13DQ70J99 1090 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 IFT81Q8WYA0 676 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 LMLNQ96KR4 655 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 SYT11Q9BT88 431 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 MAK16Q9BXY0 300 aaKnown RBP7.21□□□□□ -1.25
CSDE1-204ENST00000369530 PRDM5Q9NQX1 630 aaPredicted RBP7.21□□□□□ -1.25
CSDE1-204ENST00000369530 NENFQ9UMX5 172 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 GDAQ9Y2T3 454 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 CAPN6Q9Y6Q1 641 aa7.21□□□□□ -1.25
CSDE1-204ENST00000369530 A0A0A0MRY4 1105 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 A0A0J9YVX5 310 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 CHMP2AO43633 222 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 NCK2O43639 380 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 CSDE1O75534 798 aaKnown RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 TOM1L1O75674 476 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 PORP16435 677 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 VAV2P52735 878 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 AMPD3Q01432 767 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 SPCS2Q15005 226 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 NT5DC4Q86YG4 428 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 FAM217AQ8IXS0 508 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 HELQQ8TDG4 1101 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 NOC3LQ8WTT2 800 aaKnown RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 LARP4BQ92615 738 aaKnown RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 RNF25Q96BH1 459 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 TUBGCP5Q96RT8 1024 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 RPS6KC1Q96S38 1066 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 AGAP1Q9UPQ3 857 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 PPP1R3GB7ZBB8 358 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 O00370 1275 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 PSMA7O14818 248 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 RPN1P04843 607 aaKnown RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 ATP1A1P05023 1023 aaKnown RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 TPBGLP0DKB5 382 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 TMOD1P28289 359 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 USP46P62068 366 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 HPCAP84074 193 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 INCA1Q0VD86 236 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 SKIDA1Q1XH10 827 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 ODR4Q5SWX8 454 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 THOC7Q6I9Y2 204 aaKnown RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 TMEM154Q6P9G4 183 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 C16orf87Q6PH81 154 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 OLFML1Q6UWY5 402 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 DEPTORQ8TB45 409 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 ZFP42Q96MM3 310 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 CATSPER2Q96P56 530 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 LBHD1Q9BQE6 289 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 MRPL46Q9H2W6 279 aaKnown RBP7.21□□□□□ -1.26
CSDE1-204ENST00000369530 SLC2A4RGQ9NR83 387 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 TLR9Q9NR96 1032 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 TAB2Q9NYJ8 693 aa7.21□□□□□ -1.26
CSDE1-204ENST00000369530 EIF3FO00303 357 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 P4HA2O15460 535 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms