RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 FIP1L1Q6UN15 594 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 LARP4Q71RC2 724 aaKnown RBP eCLIP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 DZIP1Q86YF9 867 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 MYLK4Q86YV6 388 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 ANKRD18AQ8IVF6 992 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 SLC44A2Q8IWA5 706 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 TSPEARQ8WU66 669 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 HDAC2Q92769 488 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 FERMT2Q96AC1 680 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 RSRC1Q96IZ7 334 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 RBM15Q96T37 977 aaKnown RBP eCLIP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 BARD1Q99728 777 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 MYD88Q99836 296 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 KATNAL1Q9BW62 490 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 ELAC1Q9H777 363 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 FANCFQ9NPI8 374 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 PDP2Q9P2J9 529 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 WDR35Q9P2L0 1181 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 NFKBIL1Q9UBC1 381 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 CLIP2Q9UDT6 1046 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 GIMAP2Q9UG22 337 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 DDX20Q9UHI6 824 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 SERPINB13Q9UIV8 391 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 ZNF112Q9UJU3 913 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 CDC42EP3Q9UKI2 254 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 AGTPBP1Q9UPW5 1226 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 RRP7AQ9Y3A4 280 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 KNSTRNQ9Y448 316 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 SQORQ9Y6N5 450 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 MGAMO43451 1857 aa5.54□□□□□ -1.52
ECHDC1-204ENST00000368292 FRMPD2Q68DX3 1309 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 UBN2Q6ZU65 1347 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 FAM205AQ6ZU69 1335 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 MYPNQ86TC9 1320 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 ANKRD36CQ5JPF3 1778 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 SYNJ2BP-COX16A0A087WUM0 186 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 A0A0G2JNJ9 132 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 ANKRD18BA2A2Z9 1011 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 TMCO5BA8MYB1 307 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 RASA4BC9J798 803 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 PLOD2O00469 737 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 RNMTO43148 476 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 ECE2O60344 883 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 TLR5O60602 858 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 PYGLP06737 847 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 CELA3BP08861 270 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 HSPA5P11021 654 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 XPAP23025 273 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 AKAP5P24588 427 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 LIMK1P53667 647 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 LGALS4P56470 323 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 GALEQ14376 348 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 USP10Q14694 798 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 C10orf76Q5T2E6 689 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 GRAMD4Q6IC98 578 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 RALYLQ86SE5 291 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 IQCA1Q86XH1 822 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 RNF168Q8IYW5 571 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 AUTS2Q8WXX7 1259 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 BRI3BPQ8WY22 251 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 RBM18Q96H35 190 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 RBM17Q96I25 401 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 TSGA13Q96PP4 275 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 SSBP3Q9BWW4 388 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 CARD11Q9BXL7 1154 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 TEX13AQ9BXU3 409 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 TSPYL1Q9H0U9 437 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 LMAN2LQ9H0V9 348 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 UNC45AQ9H3U1 944 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 THEGQ9P2T0 379 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 DKK3Q9UBP4 350 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 POLKQ9UBT6 870 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 Q9UFV3 132 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 SRRDQ9UH36 339 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 DPP7Q9UHL4 492 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 DENND2AQ9ULE3 1009 aa5.53□□□□□ -1.52
ECHDC1-204ENST00000368292 LINC00854A0A1B0GVQ3 168 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 hCG_1642624A0A1W2PR95 340 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 CASQ2O14958 399 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 AP1G1O43747 822 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 PPFIA2O75334 1257 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 PLATP00750 562 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 POU2F2P09086 479 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 MTHFD2P13995 350 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 STMN1P16949 149 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 KCNQ1P51787 676 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 ANTXR2P58335 489 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 PPP2CBP62714 309 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 PPP2CAP67775 309 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 ZNF267Q14586 743 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 ARHGEF6Q15052 776 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 TUBB8Q3ZCM7 444 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 ARHGAP29Q52LW3 1261 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 IFIT1BQ5T764 474 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 CRTC1Q6UUV9 634 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 BTNL9Q6UXG8 535 aa5.52□□□□□ -1.53
ECHDC1-204ENST00000368292 SYNE3Q6ZMZ3 975 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms