RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 GRHL1Q9NZI5 618 aa4.17□□□□□ -1.74
CNGA1-201ENST00000358519 ANGPTL2Q9UKU9 493 aa4.17□□□□□ -1.74
CNGA1-201ENST00000358519 MGAMO43451 1857 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CCL15-CCL14A0A0B4J2E2 113 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SH3PXD2BA1X283 911 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MATN2O00339 956 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 VWA5AO00534 786 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MARCH6O60337 910 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PRDM1O75626 825 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 NOL4O94818 638 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 GAS8O95995 478 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PIGRP01833 764 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PSAPP07602 524 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PIM1P11309 404 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ANPEPP15144 967 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 STIP1P31948 543 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MCM7P33993 719 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 RPL21P46778 160 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 TMED10P49755 219 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ERFP50548 548 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ARPC4P59998 168 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PSMC5P62195 406 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 FKBP3Q00688 224 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 IL9RQ01113 521 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PDE4DQ08499 809 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PPIDQ08752 370 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SPIRE1Q08AE8 756 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SNAPC2Q13487 334 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 HNRNPDQ14103 355 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ADRM1Q16186 407 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 INAQ16352 499 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ECM1Q16610 540 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CCL15Q16663 113 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MAN2A1Q16706 1144 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 EXOC3L4Q17RC7 722 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CCDC153Q494R4 210 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SPDYAQ5MJ70 313 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 FAM83BQ5T0W9 1011 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 EPM2AIP1Q7L775 607 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PLPPR4Q7Z2D5 763 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CLNKQ7Z7G1 428 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PATL1Q86TB9 770 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 JAMLQ86YT9 394 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 VPS52Q8N1B4 723 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 TPCN2Q8NHX9 752 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ZFP28Q8NHY6 868 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 C10orf82Q8WW14 230 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CASP10Q92851 521 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 GPKOWQ92917 476 aaPredicted RBP eCLIP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PRICKLE1Q96MT3 831 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 FAM161BQ96MY7 647 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PLIN2Q99541 437 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CDX2Q99626 313 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 NTPCRQ9BSD7 190 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 NIFKQ9BYG3 293 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 C2orf40Q9H1Z8 148 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ERVK-5Q9HDB9 667 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SLCO1B3Q9NPD5 702 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 TYW1Q9NV66 732 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 EURLQ9NYK6 297 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SELENONQ9NZV5 590 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MTRF1LQ9UGC7 380 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ARMCX3Q9UH62 379 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 VAV3Q9UKW4 847 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 HBS1LQ9Y450 684 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 TELO2Q9Y4R8 837 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 TIMM22Q9Y584 194 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 NUMBLQ9Y6R0 609 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 IGKV6D-21A0A0A0MT36 114 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 hCG_1642624A0A1W2PR95 340 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CFAP69A5D8W1 941 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 A8MXQ7 604 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 NDC80O14777 642 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MAGEB2O15479 319 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CBFA2T3O75081 653 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ZWINTO95229 277 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ACSL3O95573 720 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 BAG2O95816 211 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 TFAP2AP05549 437 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 H2AFB1P0C5Y9 115 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 H2AFB2P0C5Z0 115 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 FCER1AP12319 257 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 NDUFV2P19404 249 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 S100A1P23297 94 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MAPK4P31152 587 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 RPL5P46777 297 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ACADVLP49748 655 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 KLHL30Q0D2K2 578 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 CETN1Q12798 172 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 MAPK7Q13164 816 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 DHX34Q14147 1143 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SPIDRQ14159 915 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 KCTD21Q4G0X4 260 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SLC45A4Q5BKX6 768 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ODR4Q5SWX8 454 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 SLFN12LQ6IEE8 588 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 ZNF280DQ6N043 979 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 TMEM214Q6NUQ4 689 aaKnown RBP4.16□□□□□ -1.74
CNGA1-201ENST00000358519 PPP1R21Q6ZMI0 780 aa4.16□□□□□ -1.74
CNGA1-201ENST00000358519 RNF207Q6ZRF8 634 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms