RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TXNL4AP83876 142 aaKnown RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 DRAP1Q14919 205 aaPredicted RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 CCDC33Q8N5R6 958 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 LRGUKQ96M69 825 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 GCOM2Q9BZD3 368 aaPredicted RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 RPF2Q9H7B2 306 aaKnown RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 VPS37BQ9H9H4 285 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 PARVGQ9HBI0 331 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 RIMS3Q9UJD0 308 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 DNAJC16Q9Y2G8 782 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 PCDHGA11Q9Y5H2 935 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 SLC30A1Q9Y6M5 507 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 UNCXA6NJT0 531 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 EML1O00423 815 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 BTDP43251 543 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 ESRRGP62508 458 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 SELENBP1Q13228 472 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 ITGADQ13349 1161 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 UBAP2LQ14157 1087 aaKnown RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 TMEM119Q4V9L6 283 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 BTBD8Q5XKL5 378 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 CPNE8Q86YQ8 564 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 SLC15A4Q8N697 577 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 NLRP7Q8WX94 980 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 C7orf26Q96N11 449 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 DOK1Q99704 481 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 SEPT11Q9NVA2 429 aaKnown RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 FETUBQ9UGM5 382 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 BRCA1P38398 1863 aaKnown RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 ATP6V0D1P61421 351 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 DLG4P78352 724 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 LLGL1Q15334 1064 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 AGAP7PQ5VUJ5 663 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 CCDC81Q6ZN84 652 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 HPS6Q86YV9 775 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 FBXW8Q8N3Y1 598 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 HM13Q8TCT9 377 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 GRIN3AQ8TCU5 1115 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 TANKQ92844 425 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 XAB2Q9HCS7 855 aaKnown RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 RIC8BQ9NVN3 520 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 MYRFQ9Y2G1 1151 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 TRIM64BA6NI03 449 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 CLOCKO15516 846 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 ABCB1P08183 1280 aaPredicted RBP16.31■□□□□ 0.2
RTN3-205ENST00000356000 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.2
RTN3-205ENST00000356000 KRT76Q01546 638 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 FASTKD3Q14CZ7 662 aaKnown RBP16.31■□□□□ 0.2
RTN3-205ENST00000356000 TCHHL1Q5QJ38 904 aaPredicted RBP16.31■□□□□ 0.2
RTN3-205ENST00000356000 LYSMD3Q7Z3D4 306 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 LSMEM2Q8N112 164 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 GPR88Q9GZN0 384 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 SNX25Q9H3E2 840 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 CDC14AQ9UNH5 594 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 CPQQ9Y646 472 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 STAM2O75886 525 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 FTLP02792 175 aaPredicted RBP16.31■□□□□ 0.2
RTN3-205ENST00000356000 CD247P20963 164 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 ADSSP30520 456 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 CTAG1AP78358 180 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 SUZ12Q15022 739 aaKnown RBP16.31■□□□□ 0.2
RTN3-205ENST00000356000 ANKRD26P1Q6NSI1 321 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 ADGRD1Q6QNK2 874 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 C4orf22Q6V702 233 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 TTC30AQ86WT1 665 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 ANKRD13BQ86YJ7 626 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 ZNF420Q8TAQ5 688 aaPredicted RBP16.31■□□□□ 0.2
RTN3-205ENST00000356000 HCAR2Q8TDS4 363 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 SLC35C1Q96A29 364 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 FAR2Q96K12 515 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 CD209Q9NNX6 404 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 ANKMY1Q9P2S6 941 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 ITGA11Q9UKX5 1188 aa16.31■□□□□ 0.2
RTN3-205ENST00000356000 GOLGA8RI6L899 631 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 TBCAO75347 108 aaKnown RBP16.3■□□□□ 0.2
RTN3-205ENST00000356000 PROCP04070 461 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 FGRP09769 529 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 KRT25Q7Z3Z0 450 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 TTC17Q96AE7 1141 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 DHRS4Q9BTZ2 278 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 ZNF341Q9BYN7 854 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 CNOT11Q9UKZ1 510 aaKnown RBP16.3■□□□□ 0.2
RTN3-205ENST00000356000 PSME4Q14997 1843 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
RTN3-205ENST00000356000 LAMB1P07942 1786 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 SDR42E2A6NKP2 422 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 LPXNO60711 386 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 ADSLP30566 484 aaPredicted RBP16.3■□□□□ 0.2
RTN3-205ENST00000356000 APLP1P51693 650 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 COPAP53621 1224 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 STX3Q13277 289 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 TMTC4Q5T4D3 741 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 NEK8Q86SG6 692 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 SETD3Q86TU7 594 aaPredicted RBP16.3■□□□□ 0.2
RTN3-205ENST00000356000 ARID3BQ8IVW6 561 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms