RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SCN10AQ9Y5Y9 1956 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 CFAP69A5D8W1 941 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 APOL1O14791 398 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 LCP1P13796 627 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 HDAC4P56524 1084 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 ARL4CP56559 192 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 SLC8A3P57103 927 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 GDF6Q6KF10 455 aaPredicted RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 ZNF670Q9BS34 389 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 CCDC134Q9H6E4 229 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 C10orf88Q9H8K7 445 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 FAM105AQ9NUU6 356 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 C5orf60A6NFR6 353 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 H7C0C1 242 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 PTPN1P18031 435 aaKnown RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 IL4RP24394 825 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 ATP5OP48047 213 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 PDIA2Q13087 525 aaKnown RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 HIF1AQ16665 826 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 ZC3H12AQ5D1E8 599 aaKnown RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 SLC9A4Q6AI14 798 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 NPNTQ6UXI9 565 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 SERINC5Q86VE9 423 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 TDRPQ86YL5 185 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 PLD5Q8N7P1 536 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 FAM71DQ8N9W8 422 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 TRIB2Q92519 343 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 FAF2Q96CS3 445 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 DUSP16Q9BY84 665 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 SENP6Q9GZR1 1112 aaPredicted RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 TSPYL2Q9H2G4 693 aaPredicted RBP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 GPATCH2LQ9NWQ4 482 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.41■□□□□ 0.38
SAMM50-201ENST00000350028 NAALADL1Q9UQQ1 740 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 ACTL7BQ9Y614 415 aa17.41■□□□□ 0.38
SAMM50-201ENST00000350028 GABRDO14764 452 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 GPR182O15218 404 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 SEPT4O43236 478 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 PGK1P00558 417 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 RARBP10826 455 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 BCAR1P56945 870 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 PPARDQ03181 441 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 NR1H3Q13133 447 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 CCDC38Q502W7 563 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 PQLC3Q8N755 202 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 CLEC4CQ8WTT0 213 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 CHMP6Q96FZ7 201 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 EURLQ9NYK6 297 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 GIT1Q9Y2X7 761 aa17.4■□□□□ 0.38
SAMM50-201ENST00000350028 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.4■□□□□ 0.38
SAMM50-201ENST00000350028 ATXN2Q99700 1313 aaKnown RBP17.4■□□□□ 0.38
SAMM50-201ENST00000350028 E7ESA3 106 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 THP07101 528 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 ZFXP17010 805 aaPredicted RBP17.39■□□□□ 0.37
SAMM50-201ENST00000350028 TKTP29401 623 aaKnown RBP17.39■□□□□ 0.37
SAMM50-201ENST00000350028 MGAT3Q09327 533 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 DPYSL2Q16555 572 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 WSCD1Q658N2 575 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 C1orf228Q6PIY5 440 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 ZBED8Q8IZ13 594 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 FUKQ8N0W3 1084 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 TMEM86AQ8N2M4 240 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 PCDH19Q8TAB3 1148 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 KCTD13Q8WZ19 329 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 ZFP42Q96MM3 310 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 VPS37BQ9H9H4 285 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 CTNNAL1Q9UBT7 734 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 GABRQQ9UN88 632 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 FAM169AQ9Y6X4 670 aa17.39■□□□□ 0.37
SAMM50-201ENST00000350028 EXOC1LA0A1B0GW35 172 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 BCLAF3A2AJT9 711 aaKnown RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 CHRNA1P02708 482 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 TSHRP16473 764 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 DRD4P21917 467 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 L1CAMP32004 1257 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 PHBP35232 272 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 MATKP42679 507 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 FLT3LGP49771 235 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 RASA2Q15283 850 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 CA9Q16790 459 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 ANKRD22Q5VYY1 191 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 CPLX4Q7Z7G2 160 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 MRPL10Q7Z7H8 261 aaKnown RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 TADA2BQ86TJ2 420 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 PIGZQ86VD9 579 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 ZC3H18Q86VM9 953 aaKnown RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 RTP4Q96DX8 246 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 SENP8Q96LD8 212 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 PAK5Q9P286 719 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 ZMYND8Q9ULU4 1186 aaPredicted RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 NPR3P17342 541 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 TFE3P19532 575 aaPredicted RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 LHX1P48742 406 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 VEGFBP49765 207 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 CORO7P57737 925 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 NOGQ13253 232 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms