RNA–Protein interactions for RNA: ENST00000349241.6

PTK7-204, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 3,801 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-204ENST00000349241 ADIGQ0VDE8 80 aa13.55□□□□□ -0.24
PTK7-204ENST00000349241 ZNF268Q14587 947 aaPredicted RBP13.55□□□□□ -0.24
PTK7-204ENST00000349241 PLPPR4Q7Z2D5 763 aa13.55□□□□□ -0.24
PTK7-204ENST00000349241 USP6NLQ92738 828 aa13.55□□□□□ -0.24
PTK7-204ENST00000349241 CXCL16Q9H2A7 254 aa13.55□□□□□ -0.24
PTK7-204ENST00000349241 CDHR5Q9HBB8 845 aa13.55□□□□□ -0.24
PTK7-204ENST00000349241 TMPRSS4Q9NRS4 437 aa13.55□□□□□ -0.24
PTK7-204ENST00000349241 BRWD3Q6RI45 1802 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 LMO2P25791 158 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 WDR4P57081 412 aaKnown RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 MTHFD1LQ6UB35 978 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 KCNT2Q6UVM3 1135 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 ARID3BQ8IVW6 561 aaPredicted RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 SCN4BQ8IWT1 228 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 FITM2Q8N6M3 262 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 CFAP61Q8NHU2 1237 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 CCT6BQ92526 530 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 ZFP42Q96MM3 310 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 LGMNQ99538 433 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 XYLT2Q9H1B5 865 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 HEY2Q9UBP5 337 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 CASTOR2A6NHX0 329 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 APOC4-APOC2K7ER74 178 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 CILPO75339 1184 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 ATG7O95352 703 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 APOC2P02655 101 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 ALDH18A1P54886 795 aaKnown RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 NR1H3Q13133 447 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 NOTUMQ6P988 496 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 TRABD2AQ86V40 505 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 PDCD7Q8N8D1 485 aaKnown RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 STAMBPL1Q96FJ0 436 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 MYLK2Q9H1R3 596 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 SMG5Q9UPR3 1016 aaKnown RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 B4GALT4O60513 344 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 CSPG5O95196 566 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 C22orf31O95567 290 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 TFE3P19532 575 aaPredicted RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 KLF1Q13351 362 aaPredicted RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 TAF1BQ53T94 588 aaPredicted RBP13.54□□□□□ -0.24
PTK7-204ENST00000349241 C16orf46Q6P387 395 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 BBS12Q6ZW61 710 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 NLRP9Q7RTR0 991 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 LONP2Q86WA8 852 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 DCLK2Q8N568 766 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 SCYL1Q96KG9 808 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 TXLNGYQ9BZA5 131 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 FZD8Q9H461 694 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 ACSS2Q9NR19 701 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
PTK7-204ENST00000349241 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTK7-204ENST00000349241 SPDYE5A6NIY4 337 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 SLC4A1P02730 911 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ENO1P06733 434 aaKnown RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 NQO1P15559 274 aaKnown RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 NCF2P19878 526 aaPredicted RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 BOLA3Q53S33 107 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 FBXO47Q5MNV8 452 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ZNF618Q5T7W0 954 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 TSNARE1Q96NA8 513 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 KDM4CQ9H3R0 1056 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 STYXL1Q9Y6J8 313 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 GYG2O15488 501 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 HAUS5O94927 633 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 NCAM1P13591 858 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 TAC1P20366 129 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 SLC8A1P32418 973 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 SLC26A2P50443 739 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ACVR2BQ13705 512 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 TAF1CQ15572 869 aaPredicted RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 GNASQ5JWF2 1037 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 DEFB106AQ8N104 65 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ZNF75CPQ92670 426 aaPredicted RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 LPPQ93052 612 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ASB7Q9H672 318 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 PAK5Q9P286 719 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 SLC17A6Q9P2U8 582 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ADAMTS5Q9UNA0 930 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 USH1CQ9Y6N9 552 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 A0A0G2JLL6 359 aaPredicted RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 GRIA1P42261 906 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ELF3P78545 371 aaPredicted RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 CHI3L2Q15782 390 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 NXNQ6DKJ4 435 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 PRRT2Q7Z6L0 340 aaPredicted RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 CCDC125Q86Z20 511 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 C2orf69Q8N8R5 385 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 ATP2A3Q93084 1043 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 IFT122Q9HBG6 1241 aa13.53□□□□□ -0.24
PTK7-204ENST00000349241 COL2A1P02458 1487 aaPredicted RBP13.53□□□□□ -0.24
PTK7-204ENST00000349241 CITO14578 2027 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms