RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 FASTKD3Q14CZ7 662 aaKnown RBP21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 HIF1AQ16665 826 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 ANKRD20A8PQ5CZ79 823 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 RIBC1Q8N443 379 aaPredicted RBP21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 PLD5Q8N7P1 536 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 HNRNPABQ99729 332 aaKnown RBP21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 FAM107BQ9H098 131 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 XPNPEP3Q9NQH7 507 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 CHST12Q9NRB3 414 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 FAM105AQ9NUU6 356 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 SLC38A7Q9NVC3 462 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 GPATCH2LQ9NWQ4 482 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 EURLQ9NYK6 297 aa21.24■□□□□ 0.99
CHRNA3-202ENST00000348639 CYB561D2O14569 222 aa21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 XPO1O14980 1071 aaKnown RBP21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 TGM2P21980 687 aa21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 TKTP29401 623 aaKnown RBP21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 NKX3-2P78367 333 aa21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 DARS2Q6PI48 645 aaKnown RBP21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 ZBED8Q8IZ13 594 aa21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 ZNF670Q9BS34 389 aa21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 SENP6Q9GZR1 1112 aaPredicted RBP21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 NAALADL1Q9UQQ1 740 aa21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.23■□□□□ 0.99
CHRNA3-202ENST00000348639 APOL1O14791 398 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 CHRNA1P02708 482 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 TFE3P19532 575 aaPredicted RBP21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 PDIA2Q13087 525 aaKnown RBP21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 ANKRD22Q5VYY1 191 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 SLC9A4Q6AI14 798 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 SERINC5Q86VE9 423 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 HACE1Q8IYU2 909 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 PQLC3Q8N755 202 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 FAF2Q96CS3 445 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 CHMP6Q96FZ7 201 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 CCDC134Q9H6E4 229 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 GPBP1L1Q9HC44 474 aaPredicted RBP21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 GGA2Q9UJY4 613 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 C5orf60A6NFR6 353 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 TMEM88BA6NKF7 163 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 GABRDO14764 452 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 ASGR1P07306 291 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 ARL4CP56559 192 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 CA9Q16790 459 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 RPAINQ86UA6 219 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 ZC3H18Q86VM9 953 aaKnown RBP21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 GSTCDQ8NEC7 633 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 PCDH19Q8TAB3 1148 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 DUSP16Q9BY84 665 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 TSPYL2Q9H2G4 693 aaPredicted RBP21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 CACNG4Q9UBN1 327 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 FAM169AQ9Y6X4 670 aa21.22■□□□□ 0.99
CHRNA3-202ENST00000348639 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 GOLGA8MH3BSY2 632 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 CCND3P30281 292 aaPredicted RBP21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 MLH1P40692 756 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 SLC8A3P57103 927 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 DPYSL2Q16555 572 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 EFHC1Q5JVL4 640 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 WSCD1Q658N2 575 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 C1orf228Q6PIY5 440 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 TDRPQ86YL5 185 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 FUKQ8N0W3 1084 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 CYP4X1Q8N118 509 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 ZNF317Q96PQ6 595 aaPredicted RBP21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 HTTP42858 3142 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 EXOC1LA0A1B0GW35 172 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 H7C0C1 242 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 ATP2C2O75185 946 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 ALDH1A1P00352 501 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 RPLP2P05387 115 aaKnown RBP21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 ELNP15502 786 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 PTPN1P18031 435 aaKnown RBP21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 ATP5OP48047 213 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 BCAR1P56945 870 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 CAP1Q01518 475 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 KCNA10Q16322 511 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 HP1BP3Q5SSJ5 553 aaPredicted RBP21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 VSTM1Q6UX27 236 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 MICALCLQ6ZW33 695 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 PIGZQ86VD9 579 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 LPPQ93052 612 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 ADAM33Q9BZ11 813 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 USP29Q9HBJ7 922 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 ACTL7BQ9Y614 415 aa21.21■□□□□ 0.99
CHRNA3-202ENST00000348639 TMEM120BA0PK00 339 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 E7ESA3 106 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 MYO1CO00159 1063 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 ADAMTS4O75173 837 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 IBSPP21815 317 aaPredicted RBP21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 DRD4P21917 467 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 THPOP40225 353 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 CORO7P57737 925 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 FNBP1LQ5T0N5 605 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 STRADAQ7RTN6 431 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 RTP4Q96DX8 246 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 VPS37BQ9H9H4 285 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 PPCSQ9HAB8 311 aa21.2■□□□□ 0.98
CHRNA3-202ENST00000348639 TBK1Q9UHD2 729 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms