RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 ARL2P36404 184 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 SP4Q02446 784 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 MAMLD1Q13495 774 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 EMC2Q15006 297 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 LY6KQ17RY6 165 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 SPOCD1Q6ZMY3 1216 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 RIPOR1Q6ZS17 1223 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 RBM12BQ8IXT5 1001 aaKnown RBP16.52■□□□□ 0.24
HMGA1-202ENST00000347617 ALDH16A1Q8IZ83 802 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 TAS1R2Q8TE23 839 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 ZNF526Q8TF50 670 aaPredicted RBP16.52■□□□□ 0.24
HMGA1-202ENST00000347617 SLC7A3Q8WY07 619 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 SH2D3AQ9BRG2 576 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 CNTN3Q9P232 1028 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 IKBKGQ9Y6K9 419 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 WASF2Q9Y6W5 498 aa16.52■□□□□ 0.24
HMGA1-202ENST00000347617 DENND3A2RUS2 1198 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 WDR91A4D1P6 747 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 MANSC4A6NHS7 340 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 TLR3O15455 904 aaKnown RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 AP1G1O43747 822 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 MAFO75444 373 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 ARIH2O95376 493 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 IMPDH2P12268 514 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 GARTP22102 1010 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 ADORA2AP29274 412 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 RANBP1P43487 201 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 NAMPTP43490 491 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 CDC16Q13042 620 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 MED21Q13503 144 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 LAMC2Q13753 1193 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 GRB14Q14449 540 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 MTERF2Q49AM1 385 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 TMEM259Q4ZIN3 620 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 WDR44Q5JSH3 913 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 WDR78Q5VTH9 848 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 CBWD2Q8IUF1 395 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 PALM2Q8IXS6 379 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 ULK2Q8IYT8 1036 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 NAT14Q8WUY8 206 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 IRGQQ8WZA9 623 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 EMID1Q96A84 441 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 PPP1R14BQ96C90 147 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 TUBGCP5Q96RT8 1024 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 PTPN18Q99952 460 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 FBXO6Q9NRD1 293 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 SLC17A7Q9P2U7 560 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 AMPD1P23109 780 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 RGS2P41220 211 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 NOMO3P69849 1222 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 CYP24A1Q07973 514 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 TFDP1Q14186 410 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 TFDP3Q5H9I0 405 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 C3orf62Q6ZUJ4 267 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 PDSS2Q86YH6 399 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 PDIK1LQ8N165 341 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 KLHL23Q8NBE8 558 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 OR6Y1Q8NGX8 325 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 SLC35B2Q8TB61 432 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 CPA5Q8WXQ8 436 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 MTBPQ96DY7 904 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 BTBD9Q96Q07 612 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 IQCGQ9H095 443 aaKnown RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 SMARCAD1Q9H4L7 1026 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 STN1Q9H668 368 aaKnown RBP16.51■□□□□ 0.23
HMGA1-202ENST00000347617 TMEM134Q9H6X4 195 aa16.51■□□□□ 0.23
HMGA1-202ENST00000347617 hCG_1818297A0A087WSY0 165 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 TISP43B9A030 160 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 SGK1O00141 431 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 NOP56O00567 594 aaKnown RBP16.5■□□□□ 0.23
HMGA1-202ENST00000347617 PEX1O43933 1283 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 PIGRP01833 764 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 SETSIPP0DME0 302 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
HMGA1-202ENST00000347617 UQCRBP14927 111 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 NOP14P78316 857 aaKnown RBP16.5■□□□□ 0.23
HMGA1-202ENST00000347617 SV2AQ7L0J3 742 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 NAT8LQ8N9F0 302 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 FAM172AQ8WUF8 416 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 BSNDQ8WZ55 320 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 MAML3Q96JK9 1138 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 PANX3Q96QZ0 392 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 FRMD8Q9BZ67 464 aaPredicted RBP16.5■□□□□ 0.23
HMGA1-202ENST00000347617 PTTG2Q9NZH5 202 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
HMGA1-202ENST00000347617 SLC15A5A6NIM6 579 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 H3BRJ5 948 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 BUD23O43709 281 aaKnown RBP16.49■□□□□ 0.23
HMGA1-202ENST00000347617 TMCC1O94876 653 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 CALB1P05937 261 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 HUNKP57058 714 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 LGSNQ5TDP6 509 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 C1orf146Q5VVC0 180 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 IER5Q5VY09 327 aa16.49■□□□□ 0.23
HMGA1-202ENST00000347617 TAPT1Q6NXT6 567 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms