RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PNPLA8Q9NP80 782 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 STAP1Q9ULZ2 295 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 CDY1Q9Y6F8 540 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 CHD7Q9P2D1 2997 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 LRRD1A4D1F6 860 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 DAB1O75553 588 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 GJB5O95377 273 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 CA8P35219 290 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 PCK1P35558 622 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 MATKP42679 507 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 MGAT5BQ3V5L5 792 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 ATP13A4Q4VNC1 1196 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 KCNT1Q5JUK3 1230 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 SH3PXD2AQ5TCZ1 1133 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 TRNP1Q6NT89 227 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 C8orf74Q6P047 294 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 VSTM1Q6UX27 236 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 ARCQ7LC44 396 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 POLNQ7Z5Q5 900 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 SLC39A11Q8N1S5 342 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 MMGT1Q8N4V1 131 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 GPR161Q8N6U8 529 aaKnown RBP18.14■□□□□ 0.49
CLDN4-201ENST00000340958 HSPH1Q92598 858 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 KHSRPQ92945 711 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLDN4-201ENST00000340958 ACSF2Q96CM8 615 aaPredicted RBP18.14■□□□□ 0.49
CLDN4-201ENST00000340958 KRT12Q99456 494 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 SEPT5Q99719 369 aaPredicted RBP18.14■□□□□ 0.49
CLDN4-201ENST00000340958 RC3H2Q9HBD1 1191 aaKnown RBP18.14■□□□□ 0.49
CLDN4-201ENST00000340958 INSL6Q9Y581 213 aa18.14■□□□□ 0.49
CLDN4-201ENST00000340958 HHLA1C9JL84 531 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 PI4K2BG5E9Z4 385 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 CCDC188H7C350 402 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 SOD2P04179 222 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 GLI1P08151 1106 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 DNAJB2P25686 324 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 PPM1AP35813 382 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 SULT1E1P49888 294 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 DAOAP59103 153 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 KRT17Q04695 432 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 SLC13A5Q86YT5 568 aaPredicted RBP18.13■□□□□ 0.49
CLDN4-201ENST00000340958 ATAD1Q8NBU5 361 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 KCTD6Q8NC69 237 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 FBXO22Q8NEZ5 403 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 PHOSPHO2Q8TCD6 241 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 EPC1Q9H2F5 836 aa18.13■□□□□ 0.49
CLDN4-201ENST00000340958 SYNJ2BP-COX16A0A087WUM0 186 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 TRUB2O95900 331 aaKnown RBP18.12■□□□□ 0.49
CLDN4-201ENST00000340958 NCAM1P13591 858 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 MYOGP15173 224 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 PTPN9P43378 593 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 GLUD2P49448 558 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 SLC5A3P53794 718 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 SLC25A11Q02978 314 aaKnown RBP18.12■□□□□ 0.49
CLDN4-201ENST00000340958 GPR17Q13304 367 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 DDR2Q16832 855 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 KAZNQ674X7 775 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 HERC6Q8IVU3 1022 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 ARFGAP1Q8N6T3 406 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 SPPL2BQ8TCT7 592 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 MAIP1Q8WWC4 291 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 DDX23Q9BUQ8 820 aaKnown RBP18.12■□□□□ 0.49
CLDN4-201ENST00000340958 HEMGNQ9BXL5 484 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 COX16Q9P0S2 106 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 SLC27A5Q9Y2P5 690 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 YJEFN3A6XGL0 299 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 E7ENQ6 273 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 LTFP02788 710 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 URODP06132 367 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 RPL17P18621 184 aaKnown RBP18.12■□□□□ 0.49
CLDN4-201ENST00000340958 OR1D2P34982 312 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 NOS2P35228 1153 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 TXNRD3NBQ6F5E7 133 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 GPR153Q6NV75 609 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 RNF19BQ6ZMZ0 732 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 Q7L0L9 218 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 SCAMP5Q8TAC9 235 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 PIK3R5Q8WYR1 880 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 IRGQQ8WZA9 623 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 TRIM62Q9BVG3 475 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 MTRRQ9UBK8 725 aa18.12■□□□□ 0.49
CLDN4-201ENST00000340958 YBX2Q9Y2T7 364 aaKnown RBP18.12■□□□□ 0.49
CLDN4-201ENST00000340958 MTMR11A4FU01 709 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 TLL1O43897 1013 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 RALAP11233 206 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 IL1R2P27930 398 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 MAGEA11P43364 429 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 KRT81Q14533 505 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 SLC25A52Q3SY17 297 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 SDHAF4Q5VUM1 108 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 RSPO2Q6UXX9 243 aaPredicted RBP18.11■□□□□ 0.49
CLDN4-201ENST00000340958 HFE2Q6ZVN8 426 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 C2orf15Q8WU43 125 aaKnown RBP18.11■□□□□ 0.49
CLDN4-201ENST00000340958 C8orf48Q96LL4 319 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 SLITRK1Q96PX8 696 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 VN1R3Q9BXE9 311 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 OSBPL8Q9BZF1 889 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 NAALADL1Q9UQQ1 740 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 BACE2Q9Y5Z0 518 aa18.11■□□□□ 0.49
CLDN4-201ENST00000340958 GPR15P49685 360 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 COPS2P61201 443 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms