RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 MOCS2O96007 188 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 CACNB2Q08289 660 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 RBBP5Q15291 538 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 TWF2Q6IBS0 349 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 ABHD15Q6UXT9 468 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 C12orf50Q8NA57 414 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 SCG3Q8WXD2 468 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 OXNAD1Q96HP4 312 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 BTBD10Q9BSF8 475 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 CNPY3Q9BT09 278 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 DONSONQ9NYP3 566 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 NKX1-2Q9UD57 310 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 COQ4Q9Y3A0 265 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 WDR27A2RRH5 827 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 MTA2O94776 668 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 AVPR1AP37288 418 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 CDKN2BP42772 138 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 COG7P83436 770 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 SP2Q02086 613 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 TNFAIP2Q03169 654 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 BST1Q10588 318 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 SIX1Q15475 284 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 FAM228AQ86W67 206 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 TMEM192Q8IY95 271 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 TMEM109Q9BVC6 243 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 DENND2DQ9H6A0 471 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 PIN4Q9Y237 131 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 HUS1O60921 280 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 ERBB2P04626 1255 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 CYP1A1P04798 512 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 GTF2A2P52657 109 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 FKBP1AP62942 108 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 MSS51Q4VC12 460 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 TCHHL1Q5QJ38 904 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 IZUMO2Q6UXV1 221 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 FGD4Q96M96 766 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 BFARQ9NZS9 450 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 LYPLA1O75608 230 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 TMEM63AO94886 807 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 INSRRP14616 1297 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 CYP2F1P24903 491 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 IL1R2P27930 398 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 MLH1P40692 756 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 CASP2P42575 452 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 CLNKQ7Z7G1 428 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 SCUBE1Q8IWY4 988 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 NMUR2Q9GZQ4 415 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
SEMA4D-201ENST00000339861 APOC4-APOC2K7ER74 178 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ASMTLO95671 621 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 APOC2P02655 101 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 TPH1P17752 444 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 MX2P20592 715 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 EIF4BP23588 611 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 SERPINB5P36952 375 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 SLC25A3Q00325 362 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 BTKQ06187 659 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 UBAP2LQ14157 1087 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 RNASEH2BQ5TBB1 312 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 PDZD4Q76G19 769 aaPredicted RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 SPATA24Q86W54 205 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 SPDYE1Q8NFV5 336 aaPredicted RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 PYDC1Q8WXC3 89 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 TMA16Q96EY4 203 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 APOPT1Q96IL0 206 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ZNF518BQ9C0D4 1074 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ANLNQ9NQW6 1124 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ANKRD36CQ5JPF3 1778 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 MT-CO1P00395 513 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 AKAP5P24588 427 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ACAT1P24752 427 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ITGA9Q13797 1035 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 RPS6KA2Q15349 733 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 BOLA3Q53S33 107 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 KCNT2Q6UVM3 1135 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 CRELD2Q6UXH1 353 aaPredicted RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 DSTYKQ6XUX3 929 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 BEST2Q8NFU1 509 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 LRGUKQ96M69 825 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 HMGXB4Q9UGU5 601 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 SLC39A10Q9ULF5 831 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ZMYND8Q9ULU4 1186 aaPredicted RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 NAV1Q8NEY1 1877 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 SIGLEC16A6NMB1 481 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 BIRC2Q13490 618 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ZNF268Q14587 947 aaPredicted RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 FASTKD1Q53R41 847 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 N4BP2L1Q5TBK1 243 aaPredicted RBP11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 MOB2Q70IA6 237 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ANKS1BQ7Z6G8 1248 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 SYT11Q9BT88 431 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 TXLNGYQ9BZA5 131 aa11.48□□□□□ -0.57
SEMA4D-201ENST00000339861 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms