RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SNTNA6NMZ2 147 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ERVV-2B6SEH9 535 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 HDAC3O15379 428 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 MSI1O43347 362 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 ATF2P15336 505 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 MX2P20592 715 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 HPCAL1P37235 193 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 HK2P52789 917 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 AQP5P55064 265 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 XIAPP98170 497 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 KCNH2Q12809 1159 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 IRF5Q13568 498 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 OXA1LQ15070 435 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ANO4Q32M45 955 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 IGSF11Q5DX21 431 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ZNF746Q6NUN9 644 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 RWDD4Q6NW29 188 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 LMOD2Q6P5Q4 547 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 GALNT7Q86SF2 657 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CATSPER3Q86XQ3 398 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 DEFB107AQ8IZN7 70 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 TAB3Q8N5C8 712 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 NLRP7Q8WX94 980 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 SNF8Q96H20 258 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 HERPUD2Q9BSE4 406 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 EDEM3Q9BZQ6 932 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 IFT122Q9HBG6 1241 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ABI2Q9NYB9 513 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 EPS15L1Q9UBC2 864 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CDH22Q9UJ99 828 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 SOX13Q9UN79 622 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 MTMR7Q9Y216 660 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ACTL7BQ9Y614 415 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 DGKBQ9Y6T7 804 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 SYNGAP1Q96PV0 1343 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 KIF1AQ12756 1690 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 PARP4Q9UKK3 1724 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 ILVBLA1L0T0 632 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CCNT1O60563 726 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 TSPAN1O60635 241 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 JRKO75564 520 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CD1EP15812 388 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 PRDX6P30041 224 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 TECP42680 631 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 IFITM3Q01628 133 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 PRKCEQ02156 737 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 GBE1Q04446 702 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 TFDP1Q14186 410 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 SIX1Q15475 284 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 KCNT2Q6UVM3 1135 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 KYAT3Q6YP21 454 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 CHST15Q7LFX5 561 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 TRIM59Q8IWR1 403 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 FLAD1Q8NFF5 587 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 OMA1Q96E52 524 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 UNKQ9C0B0 810 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 NEK6Q9HC98 313 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 SNTG2Q9NY99 539 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 GMIPQ9P107 970 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ARHGAP26Q9UNA1 814 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 SMG5Q9UPR3 1016 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 TNKSO95271 1327 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 GOLGA8SH3BPF8 625 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 GOLGA8MH3BSY2 632 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 KPNA4O00629 521 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 TOR1BO14657 336 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 HAT1O14929 419 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CASQ2O14958 399 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 ALOX15BO15296 676 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 COMTP21964 271 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 IVDP26440 423 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ARPP19P56211 112 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 STAT4Q14765 748 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 SUZ12Q15022 739 aaKnown RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 BBS9Q3SYG4 887 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 SGO2Q562F6 1265 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CES4AQ5XG92 561 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 NEK5Q6P3R8 708 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 CYP20A1Q6UW02 462 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 KRT28Q7Z3Y7 464 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 LINC00469Q8N7U9 141 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 ENAHQ8N8S7 591 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 TP53I13Q8NBR0 393 aaPredicted RBP10□□□□□ -0.81
PTCHD4-201ENST00000339488 HTRA1Q92743 480 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 RAB26Q9ULW5 256 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 TRAF6Q9Y4K3 522 aa10□□□□□ -0.81
PTCHD4-201ENST00000339488 MYH14Q7Z406 1995 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 C7orf72A4D263 438 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 DYNC1LI2O43237 492 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 UFL1O94874 794 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 MAGP20916 626 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 OPRL1P41146 370 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 MCAMP43121 646 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 NPEPPSP55786 919 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 POU6F2P78424 691 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 FUT2Q10981 343 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 PDIA6Q15084 440 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 DLG2Q15700 870 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms