RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 METTL23Q86XA0 190 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 DBF4BQ8NFT6 615 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 MYLPFQ96A32 169 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 C11orf84Q9BUA3 381 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 LRRC4CQ9HCJ2 640 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 TMLHEQ9NVH6 421 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 NFS1Q9Y697 457 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 SYNJ2BP-COX16A0A087WUM0 186 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 DNM1LO00429 736 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 PQBP1O60828 265 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 ENDOD1O94919 500 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 EOMESO95936 686 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 IFNB1P01574 187 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 ITIH2P19823 946 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 PCSK1P29120 753 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 CHKAP35790 457 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 PTPN9P43378 593 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 ARSEP51690 589 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 ATN1P54259 1190 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 GABPB1Q06547 395 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 BOLA3Q53S33 107 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 PPP6R3Q5H9R7 873 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 FAM182AQ5T1J6 154 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 DRICH1Q6PGQ1 229 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 HFE2Q6ZVN8 426 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 ALLCQ8N6M5 410 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 CCDC89Q8N998 374 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 OR10T2Q8NGX3 314 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 SLC35B2Q8TB61 432 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 MAK16Q9BXY0 300 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 SEMA4AQ9H3S1 761 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 COX16Q9P0S2 106 aa23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 MKI67P46013 3256 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-203ENST00000339162 SGK1O00141 431 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 NRP1O14786 923 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 IL4RP24394 825 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 MTMR3Q13615 1198 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 P3H1Q32P28 736 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 NOMO2Q5JPE7 1267 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 DCLRE1AQ6PJP8 1040 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 LRRTM3Q86VH5 581 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 KCTD13Q8WZ19 329 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 DDX23Q9BUQ8 820 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 ULBP1Q9BZM6 244 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 EPB41L4BQ9H329 900 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 DNAJB4Q9UDY4 337 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 PRG3Q9Y2Y8 225 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 M0QZQ0 153 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 DESP17661 470 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 GDF10P55107 478 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 FAM189BP81408 668 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 OVOS1Q6IE37 1185 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 NKD2Q969F2 451 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 UROC1Q96N76 676 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 RNF208Q9H0X6 261 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 CENPHQ9H3R5 247 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 ANAPC5Q9UJX4 755 aa23.41■■□□□ 1.34
PDLIM2-203ENST00000339162 BDNFP23560 247 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 SCNN1AP37088 669 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 MATKP42679 507 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 YWHAZP63104 245 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 LMNB2Q03252 620 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 RNASELQ05823 741 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 SYPL2Q5VXT5 272 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 SH2D3CQ8N5H7 860 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 CCDC185Q8N715 623 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 UHMK1Q8TAS1 419 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 CENPIQ92674 756 aaPredicted RBP23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 ACBD6Q9BR61 282 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 PCDH18Q9HCL0 1135 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 AAASQ9NRG9 546 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 TBC1D13Q9NVG8 400 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 DRG1Q9Y295 367 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 GOLGA6CA6NDK9 693 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 CYP11A1P05108 521 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 GOLGA6DP0CG33 693 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 OR1G1P47890 313 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 SULT1E1P49888 294 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 ZNF844Q08AG5 666 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 IZUMO3Q5VZ72 239 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 C1orf228Q6PIY5 440 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 RHBDF2Q6PJF5 856 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 FAM131BQ86XD5 332 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 PAK6Q9NQU5 681 aaPredicted RBP23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 GOLGA6AQ9NYA3 693 aa23.4■■□□□ 1.34
PDLIM2-203ENST00000339162 INPPL1O15357 1258 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 MAP3K6O95382 1288 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 ITGAVP06756 1048 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 USP17L7P0C7H9 530 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 GATMP50440 423 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 INTS6LQ5JSJ4 861 aaKnown RBP23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 ERMARDQ5T6L9 678 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 ARCQ7LC44 396 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 SPATA18Q8TC71 538 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 SUSD3Q96L08 255 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 RNF157Q96PX1 679 aa23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 PABPC3Q9H361 631 aaKnown RBP23.39■■□□□ 1.34
PDLIM2-203ENST00000339162 DHX35Q9H5Z1 703 aaKnown RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms