RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RALGPS2Q86X27 583 aaPredicted RBP16.1■□□□□ 0.17
PRKN-201ENST00000338468 TTC16Q8NEE8 873 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 MSANTD3Q96H12 275 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 CRACR2AQ9BSW2 395 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 DNAI2Q9GZS0 605 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 LINC00597Q9H2U6 94 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 FBXO44Q9H4M3 255 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 NMUR1Q9HB89 426 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 DUS2Q9NX74 493 aaKnown RBP16.1■□□□□ 0.17
PRKN-201ENST00000338468 TSPAN16Q9UKR8 245 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 FANCMQ8IYD8 2048 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 CACNA1IQ9P0X4 2223 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 VDRP11473 427 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 PKDCCQ504Y2 493 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 SGO2Q562F6 1265 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 NAIF1Q69YI7 327 aaPredicted RBP16.09■□□□□ 0.17
PRKN-201ENST00000338468 CCDC186Q7Z3E2 898 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 PIGZQ86VD9 579 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 DCLK2Q8N568 766 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 WBP2Q969T9 261 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 DACH1Q9UI36 760 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 CNTN6Q9UQ52 1028 aa16.09■□□□□ 0.17
PRKN-201ENST00000338468 A0A1W2PQH9 124 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 SCAMP3O14828 347 aaKnown RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 TLR5O60602 858 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 TBX18O95935 607 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 PAEPP09466 180 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 MBL2P11226 248 aaPredicted RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 CD19P15391 556 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 SLC9A1P19634 815 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 PDE4CQ08493 712 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 GAS6Q14393 721 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 PON2Q15165 354 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 RSPO4Q2I0M5 234 aaPredicted RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 HSP90AA4PQ58FG1 418 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 MIIPQ5JXC2 388 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 GJB7Q6PEY0 223 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 RBBP8NLQ8NC74 664 aaPredicted RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 UBA3Q8TBC4 463 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 CHRDQ9H2X0 955 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 ECT2Q9H8V3 914 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 LMAN1LQ9HAT1 526 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 UBE2TQ9NPD8 197 aaPredicted RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 CYLDQ9NQC7 956 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 TLR8Q9NR97 1041 aaKnown RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 SAMSN1Q9NSI8 373 aaKnown RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 RBM12Q9NTZ6 932 aaKnown RBP16.08■□□□□ 0.16
PRKN-201ENST00000338468 CFAP97Q9P2B7 532 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 NCDNQ9UBB6 729 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 KIAA1257Q9ULG3 409 aa16.08■□□□□ 0.16
PRKN-201ENST00000338468 GPR179Q6PRD1 2367 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
PRKN-201ENST00000338468 XPO1O14980 1071 aaKnown RBP16.07■□□□□ 0.16
PRKN-201ENST00000338468 NCAM2O15394 837 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 GABBR2O75899 941 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 SDHBP21912 280 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 BRD2P25440 801 aaKnown RBP16.07■□□□□ 0.16
PRKN-201ENST00000338468 PON1P27169 355 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 GJA4P35212 333 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 MAGEA9P43362 315 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 MTIF2P46199 727 aaKnown RBP16.07■□□□□ 0.16
PRKN-201ENST00000338468 IFNAR2P48551 515 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 BCAT1P54687 386 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 MTAPQ13126 283 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 CCINQ13939 588 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 MAN2A1Q16706 1144 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 GAB4Q2WGN9 574 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 ZNF528Q3MIS6 628 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 DPY19L2P1Q6NXN4 242 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 C1orf228Q6PIY5 440 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 LCLAT1Q6UWP7 414 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 BHLHA9Q7RTU4 235 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 KIAA1958Q8N8K9 716 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 SUMF1Q8NBK3 374 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 ATP2A3Q93084 1043 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 FBRSL1Q9HCM7 1045 aaKnown RBP16.07■□□□□ 0.16
PRKN-201ENST00000338468 SIX2Q9NPC8 291 aa16.07■□□□□ 0.16
PRKN-201ENST00000338468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRKN-201ENST00000338468 SPATA6Q9NWH7 488 aaPredicted RBP16.07■□□□□ 0.16
PRKN-201ENST00000338468 LAMTOR5O43504 91 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 GREM1O60565 184 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 BST2Q10589 180 aaKnown RBP16.06■□□□□ 0.16
PRKN-201ENST00000338468 CNGA2Q16280 664 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 EXOC3L4Q17RC7 722 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 TMEM196Q5HYL7 178 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 PM20D1Q6GTS8 502 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 FSTL4Q6MZW2 842 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 GBP6Q6ZN66 633 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 C11orf57Q6ZUT1 292 aaPredicted RBP16.06■□□□□ 0.16
PRKN-201ENST00000338468 ADGRG2Q8IZP9 1017 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 CPA6Q8N4T0 437 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 ENOX1Q8TC92 643 aaKnown RBP16.06■□□□□ 0.16
PRKN-201ENST00000338468 NDRG1Q92597 394 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms