RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GPBP1L1Q9HC44 474 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PCDHGC3Q9UN70 934 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 CHKAP35790 457 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MYLK4Q86YV6 388 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ATPAF2Q8N5M1 289 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 C12orf29Q8N999 325 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ARMC2Q8NEN0 867 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 hCG_1818297A0A087WSY0 165 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 CASTOR2A6NHX0 329 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 GPR25O00155 361 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PMLP29590 882 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 AUHQ13825 339 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 FSCN1Q16658 493 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 FOXR1Q6PIV2 292 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 EDEM1Q92611 657 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 HSFY1Q96LI6 401 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 SLITRK1Q96PX8 696 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 FIZ1Q96SL8 496 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 SERPINI1Q99574 410 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 C20orf96Q9NUD7 363 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 GON4LQ3T8J9 2241 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 CILPO75339 1184 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 POMCP01189 267 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 NUDT17P0C025 328 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 FSCBQ5H9T9 825 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 FAM117BQ6P1L5 589 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 AGR3Q8TD06 166 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 E2F7Q96AV8 911 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 NAT9Q9BTE0 207 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 SNRNP25Q9BV90 132 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 NOP53Q9NZM5 478 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ALS2Q96Q42 1657 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 LOC102724159A0A0B4J2E5 919 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TCRBV7S2A1N4TA0A589 114 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 O00370 1275 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 VNN1O95497 513 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TGM2P21980 687 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 KCNA3P22001 575 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF143P52747 638 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PWP2Q15269 919 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TSHZ1Q6ZSZ6 1077 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 RMDN1Q96DB5 314 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ZBTB10Q96DT7 871 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ZBED2Q9BTP6 218 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ULBP1Q9BZM6 244 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 LHX5Q9H2C1 402 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 LTBP3Q9NS15 1303 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 LRCH4O75427 683 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 CHRNB2P17787 502 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 UGP2Q16851 508 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 SEPT5Q99719 369 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 APOL2Q9BQE5 337 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TSPYL2Q9H2G4 693 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TRPV2Q9Y5S1 764 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 EDIL3O43854 480 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 CRYBB1P53674 252 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 DENND5BQ6ZUT9 1274 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PIGZQ86VD9 579 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 C1orf127Q8N9H9 656 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ANKRD52Q8NB46 1076 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 EXT2Q93063 718 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TXNRD2Q9NNW7 524 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 BMPR2Q13873 1038 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 FAM110CQ1W6H9 321 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 KLC3Q6P597 504 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PRUNE1Q86TP1 453 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PTPRN2Q92932 1015 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ERP27Q96DN0 273 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PPFIA2O75334 1257 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PAX3P23760 479 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 NOS2P35228 1153 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 DPYSL3Q14195 570 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 IPMKQ8NFU5 416 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.52□□□□□ -1.376e-7■■■■■ 48.8
PRKDC-202ENST00000338368 COLEC11Q9BWP8 271 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 CATSPERBQ9H7T0 1116 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ABI2Q9NYB9 513 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ETS1P14921 441 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PKN2Q16513 984 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 DBN1Q16643 649 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 IL31Q6EBC2 164 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PPHLN1Q8NEY8 458 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PPTC7Q8NI37 304 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF516Q92618 1163 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 GTSE1Q9NYZ3 720 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 KCNK1O00180 336 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PTPN1P18031 435 aaKnown RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 MLH1P40692 756 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 MAP3K10Q02779 954 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 YWHAHQ04917 246 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TAF11Q15544 211 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 RPRD1AQ96P16 312 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TASP1Q9H6P5 420 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ALDH1A1P00352 501 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 JCHAINP01591 159 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 PIGRP01833 764 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 SMIM10L2AP0DMW4 78 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 SMIM10L2BP0DMW5 78 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms